Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O13
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61350.1 68418.m07698 protein kinase family protein contains ...    29   2.7  
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo...    29   2.7  
At2g39360.1 68415.m04831 protein kinase family protein contains ...    29   2.7  
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro...    28   4.7  
At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic ring...    28   6.2  

>At5g61350.1 68418.m07698 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 842

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = +3

Query: 267 RLVVNKLLAESKRNVVDYAYKLVRKGEIGIVRDYFPIHFRWILLGEQVKFINLRDANALK 446
           R V+N  L   + N+ +YA  L RKG +  + D  P     I  G   KF+    A    
Sbjct: 728 RPVINPQLPREQVNLAEYAMNLHRKGMLEKIID--PKIVGTISKGSLRKFVEA--AEKCL 783

Query: 447 LEWGTDRDG 473
            E+G DR G
Sbjct: 784 AEYGVDRPG 792


>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
           haloacid dehalogenase-like hydrolase family protein /
           heavy-metal-associated domain-containing protein
           contains InterPro accession IPR001757: ATPase, E1-E2
           type; contains Pfam profiles PF00403:
           Heavy-metal-associated domain, PF00702: haloacid
           dehalogenase-like hydrolase
          Length = 883

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -3

Query: 633 VHRHC-RSLILVSNIVRIACSQFQSTPS 553
           + RHC R   LVSN V I+   F+ST S
Sbjct: 37  IRRHCSRPFFLVSNSVEISTQSFESTES 64


>At2g39360.1 68415.m04831 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 815

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +3

Query: 267 RLVVNKLLAESKRNVVDYAYKLVRKGEIGIVRDYF 371
           R V++  L   K N++++A KLV+KG++  + D F
Sbjct: 686 RPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPF 720


>At2g43800.1 68415.m05445 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 894

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 644 KRFMXXXXXXXXXXFQILSELLVHNFKVRPLVPPMRDYFPRHSITLPF-VFVTVRTSIAI 468
           +RF+           + ++EL  H   V  +V  + +YF  +S T PF +F  VR  + I
Sbjct: 778 ERFLESMNSFLNKGEKEITELQSHGDNVMKMVKEVTEYFHGNSETHPFRIFAVVRDFLTI 837


>At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic
           ring-opening dioxygenase family contains Pfam PF02900:
           Catalytic LigB subunit of aromatic ring-opening
           dioxygenase
          Length = 269

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 477 RGAYGDKNEWESDRMSWKIIPHWWNQRAY 563
           +G YGD NEWE    + K + H W +  Y
Sbjct: 204 QGRYGDVNEWEEKAPNAK-MAHPWPEHLY 231


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,041,926
Number of Sequences: 28952
Number of extensions: 260974
Number of successful extensions: 725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)