Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O11
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   0.87 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   3.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   6.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   8.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 0.87
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 92  ICSKKYLKMRYFLSYLFVLLVGLTIPIFSLYYL 190
           + SK  +     + ++     GLT PIF+L Y+
Sbjct: 128 VLSKNGIVFAGLIVFILFFAQGLTSPIFNLVYV 160


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 211 DKLWMVPGKYVPLHVG 258
           +K  +VPG Y+P  VG
Sbjct: 405 NKAKIVPGTYMPFGVG 420


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 296 VGACMGIHTTG 328
           VGA  G+H TG
Sbjct: 250 VGASFGLHATG 260


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 3   RPLRFEFSCQGKN 41
           + LRF + C+G++
Sbjct: 74  KALRFRYECEGRS 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,658
Number of Sequences: 336
Number of extensions: 1742
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)