Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O11
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical pr...    73   5e-14
AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.      73   5e-14
AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine r...    29   0.87 
U40415-9|AAK39249.3|  281|Caenorhabditis elegans Hypothetical pr...    28   1.5  
AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin reu...    28   2.0  
AF125959-2|AAD14732.1|  531|Caenorhabditis elegans Udp-glucurono...    28   2.0  
AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of...    28   2.0  
AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine r...    27   3.5  
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    27   4.7  
AC084268-1|AAM81103.2|  425|Caenorhabditis elegans Hypothetical ...    26   6.1  
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical pr...    26   8.1  
U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde dehydr...    26   8.1  

>Z68317-1|CAA92686.1|  214|Caenorhabditis elegans Hypothetical
           protein T01H3.1 protein.
          Length = 214

 Score = 72.9 bits (171), Expect = 5e-14
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +2

Query: 179 LYYLLNGKGEQISFGWFLENTSPYMWGTLGIAFSVALSVVGACMGIHTTGVSIV 340
           L+Y+L+G+G +   GWFL +TSP+MW  LGI FS++LSV+GA  GI TTG SI+
Sbjct: 26  LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSIL 79


>AB000919-1|BAA22597.1|  214|Caenorhabditis elegans VHA-4 protein.
          Length = 214

 Score = 72.9 bits (171), Expect = 5e-14
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +2

Query: 179 LYYLLNGKGEQISFGWFLENTSPYMWGTLGIAFSVALSVVGACMGIHTTGVSIV 340
           L+Y+L+G+G +   GWFL +TSP+MW  LGI FS++LSV+GA  GI TTG SI+
Sbjct: 26  LFYMLSGQGHRFDIGWFLTSTSPHMWAGLGIGFSLSLSVLGAGWGIFTTGSSIL 79


>AF106575-16|AAC78161.2|  334|Caenorhabditis elegans Serpentine
           receptor, class h protein3 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +2

Query: 104 KYLKMRYFLSYLFVLLVGLTIPIFSLYYLLNGKGEQISFGWFLENTSPYMW 256
           KYLK  +++S +FVL+  LTI I+    L N +  +I          PYMW
Sbjct: 134 KYLKYAFYMSIVFVLI--LTILIYP--DLKNQRDYKIQMEKRFGTFKPYMW 180


>U40415-9|AAK39249.3|  281|Caenorhabditis elegans Hypothetical
           protein K02G10.1 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 119 RYFLSYLFVLLVGLTIPIFSLYYLLN 196
           RYF+ +LF   +GLTI +  L++ +N
Sbjct: 174 RYFMVFLFWCAIGLTIAMPHLFFYMN 199


>AF385631-1|AAK84832.1|  671|Caenorhabditis elegans serotonin
           reuptake transporter protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 LSYLFVLLVGLTIPIFSLYYLLNGKG 205
           L +   LL  L IP+F++ YLL+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627


>AF125959-2|AAD14732.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein8 protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 107 YLKMRYFLSYLFVLLVGLTIPIFSL 181
           YL + +FLS +F+L V LT  I SL
Sbjct: 496 YLDVIFFLSLIFILTVYLTFKIISL 520


>AC024812-6|AAF59549.2|  671|Caenorhabditis elegans Modulation of
           locomotion defectiveprotein 5 protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 LSYLFVLLVGLTIPIFSLYYLLNGKG 205
           L +   LL  L IP+F++ YLL+G G
Sbjct: 602 LGWFLRLLSVLAIPVFAIIYLLSGTG 627


>AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein7 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 110 LKMRYFLSYLFVLLVGLTIPIFSLYYLLN 196
           L++ YFL +L +L + L +P++ L   L+
Sbjct: 48  LEILYFLCFLAILKLNLRVPVYQLMLFLS 76


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 122 YFLSYLFVLLVGLTIPIFSLYYLLN 196
           YFL +L VL + L IP++ L  +L+
Sbjct: 52  YFLCFLAVLKLNLKIPVYQLMLVLS 76


>AC084268-1|AAM81103.2|  425|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.1 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 178 TVLLAKRKG*ADKLWMVPGKYVPLHVGDVRHRFLRRTVRGRSLHGYSHN 324
           TV   KR     +L+    +Y    +G++ HR L   V    LHG  HN
Sbjct: 271 TVEARKRTAAMSELFRSYTRYTDERIGEL-HRVLVTEVAADKLHGVGHN 318


>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
           protein F42E11.1 protein.
          Length = 1266

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 113 KMRYFLSYLFVLLVGLTIPIFSLYY 187
           KM   ++ +F L+ G+T P FS+ Y
Sbjct: 703 KMNIVIALIFTLIRGITWPAFSVVY 727


>Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical
           protein B0491.5 protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 31  KAKIGRKKTVPFGISG*ISSNLLKKISQDEILPKLPVRALGGSH 162
           K K G     PFG+    + NL KK  Q   L +   +   GSH
Sbjct: 68  KVKDGESLAGPFGLDSKKTKNLTKKGDQPGELSEFQNKVYEGSH 111


>U00051-8|AAA91356.1|  687|Caenorhabditis elegans Aldehyde
           dehydrogenase protein11, isoform a protein.
          Length = 687

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 15  FEFSCQGKNWAKKDRPFRDKRVNQLQF 95
           FEF+     W      F DK VNQ+ F
Sbjct: 124 FEFAGVDMKWPAHTLNFNDKNVNQISF 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,334,509
Number of Sequences: 27780
Number of extensions: 166777
Number of successful extensions: 464
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)