Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O11
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   0.58 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   0.58 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   1.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   1.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    21   4.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   4.1  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   5.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   5.4  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   7.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   9.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   9.5  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 126 KYLILRYFFEQIGADLPAYPERD 58
           K L+ RY+ E++  DLP   E D
Sbjct: 264 KLLLNRYYLERLSNDLPYLEEFD 286


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 126 KYLILRYFFEQIGADLPAYPERD 58
           K L+ RY+ E++  DLP   E D
Sbjct: 264 KLLLNRYYLERLSNDLPHLEEFD 286


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 113 KMRYFLSYLFVLLVGLTIPIFSLYYLLNGKGEQIS 217
           K  ++   L +  VG+T     ++YL +  GE++S
Sbjct: 248 KTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVS 282


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +2

Query: 122 YFLSYLFV--LLVGLTIPIFSLYYLLNG 199
           YF+  L V  LLV + +  F++Y L+NG
Sbjct: 223 YFIVSLAVADLLVAVLVMPFAVYVLVNG 250


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +2

Query: 113 KMRYFLSYLFVLLVGLTIPIFSLYYLLNGKGEQIS 217
           K  ++   L +  VG++     ++YL +  GE++S
Sbjct: 235 KTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVS 269


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 296 VGACMGIHTT 325
           +G C G+HTT
Sbjct: 402 IGGCNGLHTT 411


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 295 GRSLHGYSHNWC 330
           GRSL GY  N C
Sbjct: 111 GRSLEGYPFNPC 122


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 295 GRSLHGYSHNWC 330
           GRSL GY  N C
Sbjct: 127 GRSLEGYPFNPC 138


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +2

Query: 113 KMRYFLSYLFVLLVGLTIPIFSLYYLLNGKGEQIS 217
           K  ++   L +  +G++     ++YL +  GE++S
Sbjct: 239 KTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVS 273


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
          variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 3  RPLRFEFSCQGKN 41
          + LRF + C+G++
Sbjct: 56 KALRFRYECEGRS 68


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein
          protein.
          Length = 602

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 3  RPLRFEFSCQGKN 41
          + LRF + C+G++
Sbjct: 56 KALRFRYECEGRS 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,412
Number of Sequences: 438
Number of extensions: 1970
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)