Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O09
         (564 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.6  
SB_21963| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.0  
SB_21528| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.0  

>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 167

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 201 FVIFYFIIMTYFTSYHNLFYSAYYFY 278
           +  +Y+    Y+  YH+ +Y  YY+Y
Sbjct: 116 YYYYYYYYYYYYYYYHHYYYYYYYYY 141


>SB_21963| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 504

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 262 LHITFTK*CRCFTSARRPVMAHIFYLICID 351
           LH   +  C  FT+AR+PV + +  L C++
Sbjct: 218 LHALHSSGCVAFTNARQPVASSLVLLRCLE 247


>SB_21528| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 343

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/29 (31%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 270 YFYKIMSMFHICQ--ASRDGSHFLFNLYR 350
           Y  K++ +FH+C+   + DG H L+++++
Sbjct: 158 YIKKLLDLFHMCEDLENIDGLHHLYDIFK 186


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,265,750
Number of Sequences: 59808
Number of extensions: 264898
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)