Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O09
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   5.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.1  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 257 EQIVIGSKICHNDKIKYYEFISNRDYLIRLISDFSNSY 144
           E+I +      NDK  +   ++ R+ L+RL  D + +Y
Sbjct: 95  EKIWVPDTFFANDKNSFLHDVTERNKLVRLAGDGAVTY 132


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 48  PY*KDFFM*NIYLNRFLAWRRMPW 119
           P+ K FF+   +L RFL  +R P+
Sbjct: 342 PWVKTFFIGKDFLPRFLFMKRPPY 365


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 48  PY*KDFFM*NIYLNRFLAWRRMPW 119
           P+ K FF+   +L RFL  +R P+
Sbjct: 342 PWVKTFFIGKDFLPRFLFMKRPPY 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,590
Number of Sequences: 2352
Number of extensions: 9971
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)