Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O09
         (564 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z33622-1|CAA83916.1|  737|Homo sapiens muscle glycogen synthase ...    30   6.5  
U32573-1|AAB60385.1|  736|Homo sapiens UDP glucose:glycogen 4-al...    30   6.5  
J04501-1|AAA88046.1|  737|Homo sapiens glycogen synthase protein.      30   6.5  
BC007688-1|AAH07688.1|  737|Homo sapiens glycogen synthase 1 (mu...    30   6.5  
BC003182-1|AAH03182.1|  673|Homo sapiens GYS1 protein protein.         30   6.5  
BC002617-1|AAH02617.1|  737|Homo sapiens glycogen synthase 1 (mu...    30   6.5  
AK223579-1|BAD97299.1|  737|Homo sapiens glycogen synthase 1 (mu...    30   6.5  

>Z33622-1|CAA83916.1|  737|Homo sapiens muscle glycogen synthase
           protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


>U32573-1|AAB60385.1|  736|Homo sapiens UDP glucose:glycogen
           4-alpha-D- glycosytransferase protein.
          Length = 736

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


>J04501-1|AAA88046.1|  737|Homo sapiens glycogen synthase protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


>BC007688-1|AAH07688.1|  737|Homo sapiens glycogen synthase 1
           (muscle) protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


>BC003182-1|AAH03182.1|  673|Homo sapiens GYS1 protein protein.
          Length = 673

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 260 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 298


>BC002617-1|AAH02617.1|  737|Homo sapiens glycogen synthase 1
           (muscle) protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


>AK223579-1|BAD97299.1|  737|Homo sapiens glycogen synthase 1
           (muscle) variant protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLE-LVFLSYLSRLNNSTKYV 450
           + + I   Y+F+NK   ++LE L  L+YL R+N S + V
Sbjct: 324 LYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTV 362


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,796,180
Number of Sequences: 237096
Number of extensions: 1252914
Number of successful extensions: 1999
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1999
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)