Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O09
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    27   0.13 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.40 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    24   0.92 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.5  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 551 ILNFYKFTNKNDKIYLELVFLSYLSRLNNSTKYV 450
           +LN   F NKNDK Y E   L+ +  L N  KY+
Sbjct: 78  VLNVLYFINKNDK-YEENTILTTMPLLINVVKYL 110


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = -2

Query: 563 MMYIILNFYKFTNKNDKIYLELVFLSYLSRLNNSTKYVQSN 441
           ++ + L++   T+ + +++ +L FL  L   NNS   ++SN
Sbjct: 337 LIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESN 377


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 257 EQIVIGSKICHNDKIKYYEFISNRDYLIRLISDFSNSY 144
           E+I +      NDK  +   ++ R+ L+RL  D S +Y
Sbjct: 114 EKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTY 151


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 373 IINSTLKYLYKLNKKCEPSRD 311
           I N+T++ LY LN   +P+R+
Sbjct: 580 IANNTIQELYTLNNMYKPTRE 600


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   VFFIFTHF*LFYNIKYLIKRIFLCETS 81
           +++I++HF   +   + I + F  ETS
Sbjct: 111 IYYIWSHFPYVFGEAFCIIQSFAAETS 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,159
Number of Sequences: 438
Number of extensions: 2884
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)