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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O07
         (574 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)                 33   0.13 
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)                  33   0.17 
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.38 
SB_28490| Best HMM Match : Peptidase_C48 (HMM E-Value=0.51)            29   2.0  
SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8)               29   2.0  
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)         29   2.0  
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)               29   2.7  
SB_7321| Best HMM Match : Corona_NS4 (HMM E-Value=7)                   29   2.7  
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)                 29   2.7  
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)              29   3.6  
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.2  
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)               28   6.2  
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)                28   6.2  
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)              27   8.2  
SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0)                       27   8.2  
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_4156| Best HMM Match : Ets (HMM E-Value=0)                          27   8.2  

>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
          Length = 1178

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWDKNIGNGKV 173
            R+P+ YK+ KQ RHP    +DK +   K+
Sbjct: 1080 RHPDMYKYDKQVRHPDMYKYDKQVAEIKI 1108



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWDKNI 158
            R+P+ YK+ KQARHP    +DK +
Sbjct: 1008 RHPDLYKYDKQARHPDLCKYDKQV 1031



 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWDKNI 158
            R+P+ YK+ KQ RHP    +DK +
Sbjct: 960  RHPDLYKYDKQVRHPDLCKYDKQV 983



 Score = 30.7 bits (66), Expect = 0.88
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = +3

Query: 45   CVY-AQVSMPPSYK----ERYPEYYKFSKQARHPRDVTWDKNI 158
            C Y  QV  P  YK     R+P+  K+ KQ RHP    +DK +
Sbjct: 1001 CKYDKQVRHPDLYKYDKQARHPDLCKYDKQVRHPDMYKYDKQV 1043



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = +3

Query: 45   CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 158
            C Y  QV  P  YK     R+P+  K+ KQ RHP    +DK +
Sbjct: 953  CKYDKQVRHPDLYKYDKQVRHPDLCKYDKQVRHPDMCKYDKQV 995



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWD 149
            R+P+ YK+ KQ RHP    +D
Sbjct: 1032 RHPDMYKYDKQVRHPDMCKYD 1052



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWD 149
            R+P+ YK+ KQ RHP    +D
Sbjct: 1056 RHPDMYKYDKQVRHPDMCKYD 1076



 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWDKNI 158
            R+P+  K+ KQ RHP    +DK +
Sbjct: 984  RHPDMCKYDKQVRHPDMCKYDKQV 1007



 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 87   RYPEYYKFSKQARHPRDVTWDKNI 158
            R+P+  K+ KQ RHP    +DK +
Sbjct: 948  RHPDLCKYDKQVRHPDLYKYDKQV 971



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +3

Query: 45   CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 158
            C Y  QV  P  YK     R+P+  K+  Q RHP    +DK +
Sbjct: 1025 CKYDKQVRHPDMYKYDKQVRHPDMCKYDIQVRHPDMYKYDKQV 1067



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +3

Query: 45   CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 158
            C Y  QV  P  YK     R+P+  K+  Q RHP    +DK +
Sbjct: 1049 CKYDIQVRHPDMYKYDKQVRHPDMCKYDIQVRHPDMYKYDKQV 1091


>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
          Length = 798

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -1

Query: 334 QSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYP--ALPNNPSSFCPSVP 176
           ++N+  +  VSP+ PK  V  +CP N P S LKN    P   LP +  +  P +P
Sbjct: 611 KNNMKTEPIVSPSIPKNTVSTSCPGN-PPSILKNSSAVPPNGLPESKPAPIPVIP 664


>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 650

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 26/102 (25%), Positives = 42/102 (41%)
 Frame = -1

Query: 439 VFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPS 260
           +F+ + H   P    F  PP          ++   Q + PP     P  P +  P A  +
Sbjct: 163 LFILRQHPSYPPTQPF-YPPTQPFYPPTPSSYPPTQPSYPPTAPSYPPTPSSYPPIA--A 219

Query: 259 NLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTS 134
           + P ++       P+ P  PSS+ P+ P+  P   FLS  T+
Sbjct: 220 SYPPTAPSYNPTAPSYPPTPSSYPPTQPSHPPTAPFLSSDTT 261



 Score = 30.3 bits (65), Expect = 1.2
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = -1

Query: 373 LLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS 194
           LLI R     L    + PP     P  P + +P   P   P       +  P+ P  PSS
Sbjct: 493 LLILRHNLLILRQHPSYPPTQPSYPPTPSSYLPTQ-PYYPPPQPYPPTQ--PSYPPTPSS 549

Query: 193 FCPSVPNTFPLPMFLSHVTSL 131
           + P+ P+  P   FLS  T+L
Sbjct: 550 YPPTQPSYPPTAPFLSADTTL 570


>SB_28490| Best HMM Match : Peptidase_C48 (HMM E-Value=0.51)
          Length = 483

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -1

Query: 289 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 164
           KT    +C S+  + + + C V+  LP+  + S+F P +P + P
Sbjct: 105 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPMIPYSLP 148


>SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8)
          Length = 640

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -1

Query: 289 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 164
           KT    +C S+  + + + C V+  LP+  + S+F P +P + P
Sbjct: 505 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPMIPYSLP 548


>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
          Length = 708

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 247 SSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTS 134
           SS  +  V P L N  + +CP+VPN  PLP FL  + S
Sbjct: 376 SSSSDTPVSPVL-NASTQYCPTVPNK-PLPSFLPALQS 411


>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1011

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 319 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLP 158
           P   ++P+ P T   ++ PS     S  +    P+ P+ PS+  PS P+T   P
Sbjct: 48  PSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPST--PSTPSTPSTP 99



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 304 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLPM 155
           +P+ P T    + PS     S  +    P++PN PS+   PS P+T   P+
Sbjct: 191 TPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPI 241



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 304 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLPM 155
           +P+ P T    + PS     S  +    P++PN PS+   PS P+T   P+
Sbjct: 741 TPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPI 791



 Score = 28.3 bits (60), Expect = 4.7
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 304 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLP 158
           +P+ P T    + PS     SL +    P+ P+ PS+   PS+PNT   P
Sbjct: 654 TPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTP 703



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 319 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 146
           P    +P+ P T    + PS     S  +  + P  P+ PS+  PS P T   P  LS
Sbjct: 132 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPST--PSAPGTPITPSTLS 187



 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 304 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTSL 131
           +P+ P T    + PS     S+ +    P+ P+ PS+  PS P+T    + L H+  L
Sbjct: 529 TPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPST--PSTPSTLVHLVHLVHLVHL 584


>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
          Length = 3561

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
 Frame = +3

Query: 147  DKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKL-EGQAYGTRVLGPAGDTSNFGG 323
            +K IG G   G  G    G  G+ G          G L E   +G+   GP G   N GG
Sbjct: 1685 NKGIGKGTEPGGSGGGHGGTGGR-GRNAPIVGLAYGNLYEPTEFGSSGGGPVGTPGNGGG 1743

Query: 324  RLDWSNKNANAALDISKQIGGRPNLSASGAG-VWNFDKNTRLSAG-GSLSTMGRGKP 488
            RL + N      +D      G   L   G G V +   +  +  G GS+   G G P
Sbjct: 1744 RL-FLNVTFLLEIDGILSANGADGLPQGGGGSVGSIWVHCNIIKGYGSIRANGGGSP 1799


>SB_7321| Best HMM Match : Corona_NS4 (HMM E-Value=7)
          Length = 139

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -1

Query: 289 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 164
           KT    +C S+  + + + C V+  LP+  + S+F P +P + P
Sbjct: 32  KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPVIPYSLP 75


>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
          Length = 1702

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -1

Query: 289 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFPLPMF 152
           KT    +C S+  + + + C V+  LP+  + S+F P +P  F LP +
Sbjct: 362 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPVIP--FSLPQY 407


>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 899

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +3

Query: 147 DKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGR 326
           + N GN   F +   N +   G +G        + G   GQA  T   G  G+T NFGG+
Sbjct: 305 NSNYGNYSNFSSDNGNYNNFSGSSGNQMGGGVVNSGNFGGQA-NTGNFGGQGNTGNFGGQ 363

Query: 327 LDWSNKN 347
              + +N
Sbjct: 364 QAMNTQN 370


>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
          Length = 440

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/56 (30%), Positives = 21/56 (37%)
 Frame = -1

Query: 319 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMF 152
           P+F   P      VPY+ P              P L N PSS  P      P+P+F
Sbjct: 366 PQFMQQPPTLSQGVPYSMPPRPGAPGTMPTGPVPLLGNPPSSQAPPARGPRPMPLF 421


>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1597

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
 Frame = +3

Query: 159 GNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWS 338
           G+G ++   G NDD  FG +G     FNDD    +G   G          +N+   ++ +
Sbjct: 314 GHG-LYSNDGNNDDAHFGDSG-RHDNFNDDISN-DGNLNGGGANNNNNKNNNYNSGINNN 370

Query: 339 NK---NANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGK 485
           N    N+ ++   +   G   N   S  G   F  N   +  G+ +  G  K
Sbjct: 371 NNNNYNSGSSNGRNTNNGNNNNAGTSNVGNNGFTNNGVNNNNGNSNNGGNDK 422


>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1151

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 331  SNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYP-ALPNNPSSFCPSVPNTFP 164
            ++ P  F +   G   L P   P N P S     R++    PN P  F  + PN+FP
Sbjct: 1064 NSFPNIFRMHTLGEPNL-PEHFPENYPNSFPNIFRMHTLGEPNLPEHFTENYPNSFP 1119


>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1042

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
 Frame = +3

Query: 126 HPRDVTWDKNIGN----GKVFGTLGQNDDGLFGKAGYT--RQFFN---DDRGKLEGQAYG 278
           H + +  D+ +G+    GK +G LG   +  F ++ YT  R+++N   +   + + +   
Sbjct: 285 HEQALKIDQELGDRRAEGKSYGNLG---NAAFARSDYTKAREYYNKCLEIAVQFDSKQDQ 341

Query: 279 TRVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWN 425
             V    G+T  F      + ++   ALD+++ IG R   +++  G+ N
Sbjct: 342 WMVYHSLGNTFYFQDDFRQALEHQKKALDVARAIGARGGEASALGGIGN 390


>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
          Length = 1153

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 340 LDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPS 197
           L  S++PP    SPA      P A     P SS  +   +PA PN P+
Sbjct: 331 LKGSSIPPSPNRSPAASPAPSPSAVKPFHPVSSAPSAIKFPAKPNVPA 378


>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
          Length = 1671

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = -1

Query: 292  PKTLVPYACPSNLPRSSLKNCRVYPALPNN-PSSFCPSVPNTFPLP 158
            P    P + P   P +S+       ++P   P++F PS P   P P
Sbjct: 1023 PTKSTPTSMPRKTPNTSMPTKSTPTSMPRKTPNTFIPSTPQVGPTP 1068


>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
          Length = 836

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 328 NLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN 206
           +LP  +E+    P +LV Y   SN  R   +  +++P LP+
Sbjct: 361 SLPDDYELDVPSP-SLVDYVISSNRVRQKFQFLKIHPLLPH 400


>SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 655

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 195 HFVRVYRILFRCLCSC 148
           HF R YR + R LCSC
Sbjct: 639 HFRRAYRRMLRALCSC 654


>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -1

Query: 274 YACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTSLG 128
           Y CP      +   CR    LP+  S+F PS  + +P    L   T+LG
Sbjct: 9   YRCPCPSSECNGAICRYPEVLPSPASTFSPSSCSFYPPERKLVPFTALG 57


>SB_4156| Best HMM Match : Ets (HMM E-Value=0)
          Length = 516

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 304 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS 194
           S   P ++   +C +  P SSL + R +P + +NP++
Sbjct: 243 SALAPASVSTQSCTAYTPTSSLYDSRPHPVITSNPNA 279


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,567,143
Number of Sequences: 59808
Number of extensions: 494980
Number of successful extensions: 1269
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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