Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O06
         (437 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens ...    29   7.0  

>AK126160-1|BAC86466.1|  203|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44172 fis, clone THYMU2036085. ).
          Length = 203

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 391 VYYYLCTKTYNSIY--ILKLIFYKSQLKYC*FKSTL 290
           +++YLC   Y S+Y  +L+ +F    L+ C F S+L
Sbjct: 95  LHFYLCVSVYFSVYLSVLQSVFLFLALRQCLFLSSL 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,288,315
Number of Sequences: 237096
Number of extensions: 1191183
Number of successful extensions: 4070
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4064
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)