Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O06
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    29   1.1  
AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...    29   1.5  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   3.4  
Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 9   QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQR*NWC 116
           QCQ  +    AKY      Q+C+  +  H Q+  WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -3

Query: 255 LNEWCIELLPTGVEVQRRGGRLEKIQFSAQRVV-VAVKDIGVCGGRRCTNFIFEHV 91
           + +W  +L  + ++ +     L K++   +R+  V VK+IG+  G R  +FIF  +
Sbjct: 235 IKDWDSKLEISEIDAKNLTESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRI 290


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 77  VPEWTTCSKIKL-VHLRPPHTPMSLT 151
           V E   C K+K+ V+ +PPH P+ +T
Sbjct: 258 VREKKNCDKLKINVYFKPPHPPVEIT 283


>Z82267-3|CAB05191.1|  186|Caenorhabditis elegans Hypothetical
           protein F38C2.5 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 40  PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 141
           P +PQ  ++    +G+   F D  GASA+++ TD
Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184


>Z92789-6|CAB07218.2|  303|Caenorhabditis elegans Hypothetical
           protein H02I12.4 protein.
          Length = 303

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 41  QIFLKFRTSTLSVPEWTTCSKIKLVHLRPPH-TPMSLTATTTLWAE 175
           ++ +K+   TL   +   CS    VHLR PH  P ++  +T +  E
Sbjct: 2   KLIIKYTVLTLFYAQLINCSGYLEVHLRSPHEQPATVNISTDVQNE 47


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
            F40H6.5 protein.
          Length = 1288

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 89   TTCSKIKLVHLRPPHTPMSLTATTT 163
            +T   + +  +RPP TP + T+TTT
Sbjct: 1140 STIDTVSMACVRPPTTPTTTTSTTT 1164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,461,680
Number of Sequences: 27780
Number of extensions: 195523
Number of successful extensions: 511
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)