Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O04
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr 1|||... 26 2.7
SPCC1235.10c |sec6||exocyst complex subunit Sec6|Schizosaccharom... 26 2.7
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 26 2.7
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 3.5
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 6.2
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 25 6.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 6.2
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 25 6.2
SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 25 8.2
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 25 8.2
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 25 8.2
>SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 26.2 bits (55), Expect = 2.7
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 187 IGCDVLTVPLQRRSR*TKPR----RDHQSLGWCKIYIACQQVQQLK*AVFGDESGFLHYG 354
+ V VP+ + TKP RD +SLG IAC+ Q L+ +V S F H G
Sbjct: 176 VSIHVSLVPVINGEQKTKPTQQAIRDLRSLGITPDLIACRCKQPLEKSVIDKISLFCHVG 235
>SPCC1235.10c |sec6||exocyst complex subunit
Sec6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 730
Score = 26.2 bits (55), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 213 RDSKNIAPNGDDTTFLSSPDVYASLRSFR 127
RD+K+ P+ D FLS + LR+FR
Sbjct: 213 RDAKSSLPDSQDGPFLSLQGMTRQLRNFR 241
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +2
Query: 200 FLLSLYREGAGKQSQEEITNLLG-----GAKYISPVNKY 301
F + L E AG ++ N LG GAK++ P+ KY
Sbjct: 217 FDIRLLEEVAGNSKGPDLANKLGTVEINGAKHLGPIGKY 255
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.8 bits (54), Expect = 3.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 385 SILVPDVHFISHSEEIRIHPRKLPT*AAVLVDRRYI--FCTTQEIGDLFLA 239
S+ P+V F H++E+ +PR +PT + +D + TT D+F A
Sbjct: 1969 SVSTPEVRF--HADEVSNYPRHVPTDSHGSLDENSLGELVTTLHSLDVFFA 2017
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 6.2
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = -3
Query: 378 WFPTYILLAIVKKSGFIP---ENCL-LKLL 301
+FPT +L +V +S F+P ENC L+LL
Sbjct: 245 FFPTILLYPLVYQSDFVPSVSENCTPLELL 274
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 6.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 180 RLHWVRCSYCPSTEKEPVNKAKKR 251
R+ W R P+ E+E V KAKKR
Sbjct: 274 RVEWKR--QLPAAEREKVEKAKKR 295
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.0 bits (52), Expect = 6.2
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 249 SSWLCLPAPSL*RDSKNIAPNGDDTTFLSSPDVYASLRSFREALSMASP 103
SS C P + D+ N P GD T S Y++ S ++ +SP
Sbjct: 120 SSVACFPYAT--SDAPNPIPRGDSATSTSIAPTYSASDSSATTITSSSP 166
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 6.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 365 YVGNQYTLNEWFTITARQYESEIDTIDFKDTKK 463
YVG + + + + R Y +DTI K T+K
Sbjct: 38 YVGGLHAIYYFPKLNPRNYHKFVDTISRKPTRK 70
>SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 674
Score = 24.6 bits (51), Expect = 8.2
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 134 LLKEAYTSGEDKNV-VSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSL 310
+L+E T + +V + + L L EGAG+Q E+ L Y+ + S++
Sbjct: 574 ILQEVMTMAREHHVRIEANFANTVLSILLVEGAGRQLYPEMDLLSNATPYLRSASSKSNV 633
Query: 311 S 313
S
Sbjct: 634 S 634
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 24.6 bits (51), Expect = 8.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 114 STKPP*-NSLRKRIHPVKTRMWCRLHWVRC 200
S KPP NS K P KTR W ++ RC
Sbjct: 224 SVKPPSPNSDSKFFLPFKTRPWKEVYAERC 253
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 8.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 350 MANKMYVGNQYTLNEWFTITARQYESEID 436
M + ++G ++ LNE+FT+ Q S ++
Sbjct: 256 MMERCWLGPEHFLNEFFTLNTHQKVSSLN 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,216,313
Number of Sequences: 5004
Number of extensions: 49309
Number of successful extensions: 155
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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