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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O04
         (491 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502...    38   0.004
11_02_0012 - 7346282-7347136,7347234-7347593                           30   1.2  
01_06_0824 - 32243495-32244319,32244449-32244859                       30   1.2  
03_05_0294 + 22855503-22855946,22856346-22856399                       29   1.5  
11_01_0771 + 6453130-6454488                                           29   2.0  
01_01_1152 + 9170628-9171899                                           29   2.0  
09_02_0462 + 9583558-9584910                                           28   3.5  
01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154...    28   3.5  
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345     28   4.7  
03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874...    27   6.2  
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700...    27   6.2  
07_03_1622 + 28193862-28195181                                         27   8.2  
04_03_0980 + 21406822-21409496,21410322-21410376                       27   8.2  
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331...    27   8.2  

>03_05_0293 +
           22849103-22849513,22849670-22849756,22850156-22850284,
           22850507-22851262,22853474-22854250
          Length = 719

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
 Frame = +2

Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSLSRQF----- 322
           G  +NV  SPL     LSL   GAG  +++++ + LGG      ++ ++    Q      
Sbjct: 32  GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91

Query: 323 SGMNPDFFTMANKMYVGNQYTLNEWF-TITARQYESEIDTIDFK 451
           SG        A+ ++V    +L + F  +   +Y++E  ++DF+
Sbjct: 92  SGAGGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQ 135


>11_02_0012 - 7346282-7347136,7347234-7347593
          Length = 404

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 125 SLKLLKEAYTSGED--KNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGA 274
           +L+L K     G++  +NVV SP+     L+L   GA   + +E+  LLG A
Sbjct: 15  ALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAA 66


>01_06_0824 - 32243495-32244319,32244449-32244859
          Length = 411

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
 Frame = +2

Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLL---GGAKYISPVNKYSSLS-RQFS 325
           G DKN+  SPL     L+L   GA  ++ ++I   L   GG  + +  +  +  S    S
Sbjct: 29  GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88

Query: 326 GMNPD----FFTMANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKD-TKKAADIVNQW 487
           G   D        AN ++V     L   +  + A +Y +E   + F+D  ++A   +N+W
Sbjct: 89  GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148


>03_05_0294 + 22855503-22855946,22856346-22856399
          Length = 165

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 170 NVVSSPLGAMFLLSLYREGAGKQSQEEITNLLG 268
           NV  SPL     LSL   GAG  +++++ +LLG
Sbjct: 45  NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLG 77


>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +2

Query: 80  RDYERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITN 259
           R +   A+   +   +++L      +   +N+  SPL     LSL   GA   + +EI  
Sbjct: 8   RRHRHRAISGGLTALAVRLADRLGAASPGRNLAFSPLSVHAALSLAAAGAAGGTLDEILA 67

Query: 260 LLGGA 274
           +LG A
Sbjct: 68  VLGAA 72


>01_01_1152 + 9170628-9171899
          Length = 423

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLG 268
           G+ +N + SPL     L+L  +GA  ++Q E+   LG
Sbjct: 56  GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLG 92


>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 89  ERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGA 196
           ER   G+A D+   KL KEA   G  K   SS  GA
Sbjct: 166 ERLKEGEAADEEMKKLKKEAKKKGASKESTSSKSGA 201


>01_06_1194 -
           35313132-35313154,35314462-35314604,35314751-35315444,
           35315746-35315895,35316011-35316419
          Length = 472

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = +2

Query: 98  ALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAK 277
           A GD+   A   LL E Y         +S LGA+F +S    GAG  S      +LG A 
Sbjct: 14  AAGDS-GAAETSLLPERYAGAGTPAAAASVLGAVFNVSTSVVGAGIMSIPAAMRVLGVAP 72

Query: 278 YISPV 292
            ++ V
Sbjct: 73  TVALV 77


>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
          Length = 654

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = -3

Query: 258 LVISSWLCLPAPSL*RDSKNIAPNGDDTTFLSSPDVYASLRSFREALSMASPR 100
           LV+S+  C P P+L R    +AP  D   +L  PD  A  R    AL + S R
Sbjct: 242 LVVSASRCFPIPNLFRCRDEVAPR-DGDVWLYRPDADALRRDL--ALPVGSCR 291


>03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,
            8746665-8746893,8747314-8747420,8747560-8747622,
            8747883-8747983,8748996-8749090,8749330-8749350,
            8749987-8750082,8750188-8750308,8750415-8750570,
            8750679-8750869,8751207-8751478,8751853-8751954,
            8752006-8752038,8752132-8752308,8752397-8752466,
            8752512-8752585,8752667-8752908,8752983-8753129,
            8753526-8753751,8753893-8753970,8754378-8754521,
            8754829-8755008,8755335-8755394,8755484-8755523,
            8758653-8759137
          Length = 1294

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 266  GGAKYISPVNKYSSLSRQFSGMN-PDFFTMANKMYVGNQYTLNE 394
            GG+   S  +  +S+S  FSGMN P  F+     Y  +Q T+ E
Sbjct: 1000 GGSSPESTGSVETSISSHFSGMNYPSLFSSKPSGYGASQQTIRE 1043


>02_04_0513 -
           23569212-23569675,23569759-23569801,23569888-23570000,
           23570099-23570158,23570472-23570541,23570887-23570951,
           23571548-23571685,23571764-23573015
          Length = 734

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
 Frame = +2

Query: 107 DAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFL-LSLYREGAGKQSQ-EEITNLLGGAKY 280
           DAI K    +LK+  T  +  N+  SP+ A+ L +  Y +   K      I N L    Y
Sbjct: 159 DAIFKQCDAILKKLMTQ-KCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSY 217

Query: 281 ISPVNKYSSLSRQFSGM---NP------DFFTMANKMYVGNQYTLNEWFTITARQYESEI 433
            SP    + +   FS     NP      D+    NKM+     T+ +     A +   E+
Sbjct: 218 TSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIATEAHVEV 277

Query: 434 DTIDFKDTK 460
           D  D K  K
Sbjct: 278 DRADSKRRK 286


>07_03_1622 + 28193862-28195181
          Length = 439

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +1

Query: 4   RTSQDDQVLFICHCGVQCAGVPYFRARL*TDSP 102
           RT +       CH GV  AG  YF  RL  D P
Sbjct: 26  RTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWP 58


>04_03_0980 + 21406822-21409496,21410322-21410376
          Length = 909

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 150 IHPVKTRMWCRLHWVRCSYCPSTE 221
           I P+    WC L W R   CP  E
Sbjct: 671 ITPLPGGQWCCLKWCRIERCPKIE 694


>02_02_0661 -
           12731005-12731238,12732756-12732884,12732969-12733193,
           12733302-12733478,12733576-12733788
          Length = 325

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 165 SSPDVYASLRSFREALSMASPRAVRS*SRPKIWNACTLHTTVTNK 31
           + PD +   ++ RE   +ASP  +   + P +W+   L T V N+
Sbjct: 101 ADPDPFNGAKTIRELYEIASPNYIGKPTVPVLWDK-QLKTVVNNE 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,515,330
Number of Sequences: 37544
Number of extensions: 332395
Number of successful extensions: 783
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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