BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_O04 (491 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 38 0.004 11_02_0012 - 7346282-7347136,7347234-7347593 30 1.2 01_06_0824 - 32243495-32244319,32244449-32244859 30 1.2 03_05_0294 + 22855503-22855946,22856346-22856399 29 1.5 11_01_0771 + 6453130-6454488 29 2.0 01_01_1152 + 9170628-9171899 29 2.0 09_02_0462 + 9583558-9584910 28 3.5 01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154... 28 3.5 02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 28 4.7 03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874... 27 6.2 02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 27 6.2 07_03_1622 + 28193862-28195181 27 8.2 04_03_0980 + 21406822-21409496,21410322-21410376 27 8.2 02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 27 8.2 >03_05_0293 + 22849103-22849513,22849670-22849756,22850156-22850284, 22850507-22851262,22853474-22854250 Length = 719 Score = 37.9 bits (84), Expect = 0.004 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Frame = +2 Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSLSRQF----- 322 G +NV SPL LSL GAG +++++ + LGG ++ ++ Q Sbjct: 32 GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91 Query: 323 SGMNPDFFTMANKMYVGNQYTLNEWF-TITARQYESEIDTIDFK 451 SG A+ ++V +L + F + +Y++E ++DF+ Sbjct: 92 SGAGGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQ 135 >11_02_0012 - 7346282-7347136,7347234-7347593 Length = 404 Score = 29.9 bits (64), Expect = 1.2 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 125 SLKLLKEAYTSGED--KNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGA 274 +L+L K G++ +NVV SP+ L+L GA + +E+ LLG A Sbjct: 15 ALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAA 66 >01_06_0824 - 32243495-32244319,32244449-32244859 Length = 411 Score = 29.9 bits (64), Expect = 1.2 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%) Frame = +2 Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLL---GGAKYISPVNKYSSLS-RQFS 325 G DKN+ SPL L+L GA ++ ++I L GG + + + + S S Sbjct: 29 GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88 Query: 326 GMNPD----FFTMANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKD-TKKAADIVNQW 487 G D AN ++V L + + A +Y +E + F+D ++A +N+W Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148 >03_05_0294 + 22855503-22855946,22856346-22856399 Length = 165 Score = 29.5 bits (63), Expect = 1.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 170 NVVSSPLGAMFLLSLYREGAGKQSQEEITNLLG 268 NV SPL LSL GAG +++++ +LLG Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLG 77 >11_01_0771 + 6453130-6454488 Length = 452 Score = 29.1 bits (62), Expect = 2.0 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = +2 Query: 80 RDYERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITN 259 R + A+ + +++L + +N+ SPL LSL GA + +EI Sbjct: 8 RRHRHRAISGGLTALAVRLADRLGAASPGRNLAFSPLSVHAALSLAAAGAAGGTLDEILA 67 Query: 260 LLGGA 274 +LG A Sbjct: 68 VLGAA 72 >01_01_1152 + 9170628-9171899 Length = 423 Score = 29.1 bits (62), Expect = 2.0 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 158 GEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLG 268 G+ +N + SPL L+L +GA ++Q E+ LG Sbjct: 56 GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLG 92 >09_02_0462 + 9583558-9584910 Length = 450 Score = 28.3 bits (60), Expect = 3.5 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 89 ERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGA 196 ER G+A D+ KL KEA G K SS GA Sbjct: 166 ERLKEGEAADEEMKKLKKEAKKKGASKESTSSKSGA 201 >01_06_1194 - 35313132-35313154,35314462-35314604,35314751-35315444, 35315746-35315895,35316011-35316419 Length = 472 Score = 28.3 bits (60), Expect = 3.5 Identities = 22/65 (33%), Positives = 29/65 (44%) Frame = +2 Query: 98 ALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLLGGAK 277 A GD+ A LL E Y +S LGA+F +S GAG S +LG A Sbjct: 14 AAGDS-GAAETSLLPERYAGAGTPAAAASVLGAVFNVSTSVVGAGIMSIPAAMRVLGVAP 72 Query: 278 YISPV 292 ++ V Sbjct: 73 TVALV 77 >02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 Length = 654 Score = 27.9 bits (59), Expect = 4.7 Identities = 20/53 (37%), Positives = 26/53 (49%) Frame = -3 Query: 258 LVISSWLCLPAPSL*RDSKNIAPNGDDTTFLSSPDVYASLRSFREALSMASPR 100 LV+S+ C P P+L R +AP D +L PD A R AL + S R Sbjct: 242 LVVSASRCFPIPNLFRCRDEVAPR-DGDVWLYRPDADALRRDL--ALPVGSCR 291 >03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324, 8746665-8746893,8747314-8747420,8747560-8747622, 8747883-8747983,8748996-8749090,8749330-8749350, 8749987-8750082,8750188-8750308,8750415-8750570, 8750679-8750869,8751207-8751478,8751853-8751954, 8752006-8752038,8752132-8752308,8752397-8752466, 8752512-8752585,8752667-8752908,8752983-8753129, 8753526-8753751,8753893-8753970,8754378-8754521, 8754829-8755008,8755335-8755394,8755484-8755523, 8758653-8759137 Length = 1294 Score = 27.5 bits (58), Expect = 6.2 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 266 GGAKYISPVNKYSSLSRQFSGMN-PDFFTMANKMYVGNQYTLNE 394 GG+ S + +S+S FSGMN P F+ Y +Q T+ E Sbjct: 1000 GGSSPESTGSVETSISSHFSGMNYPSLFSSKPSGYGASQQTIRE 1043 >02_04_0513 - 23569212-23569675,23569759-23569801,23569888-23570000, 23570099-23570158,23570472-23570541,23570887-23570951, 23571548-23571685,23571764-23573015 Length = 734 Score = 27.5 bits (58), Expect = 6.2 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Frame = +2 Query: 107 DAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFL-LSLYREGAGKQSQ-EEITNLLGGAKY 280 DAI K +LK+ T + N+ SP+ A+ L + Y + K I N L Y Sbjct: 159 DAIFKQCDAILKKLMTQ-KCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSY 217 Query: 281 ISPVNKYSSLSRQFSGM---NP------DFFTMANKMYVGNQYTLNEWFTITARQYESEI 433 SP + + FS NP D+ NKM+ T+ + A + E+ Sbjct: 218 TSPSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIATEAHVEV 277 Query: 434 DTIDFKDTK 460 D D K K Sbjct: 278 DRADSKRRK 286 >07_03_1622 + 28193862-28195181 Length = 439 Score = 27.1 bits (57), Expect = 8.2 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +1 Query: 4 RTSQDDQVLFICHCGVQCAGVPYFRARL*TDSP 102 RT + CH GV AG YF RL D P Sbjct: 26 RTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWP 58 >04_03_0980 + 21406822-21409496,21410322-21410376 Length = 909 Score = 27.1 bits (57), Expect = 8.2 Identities = 10/24 (41%), Positives = 11/24 (45%) Frame = +3 Query: 150 IHPVKTRMWCRLHWVRCSYCPSTE 221 I P+ WC L W R CP E Sbjct: 671 ITPLPGGQWCCLKWCRIERCPKIE 694 >02_02_0661 - 12731005-12731238,12732756-12732884,12732969-12733193, 12733302-12733478,12733576-12733788 Length = 325 Score = 27.1 bits (57), Expect = 8.2 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -3 Query: 165 SSPDVYASLRSFREALSMASPRAVRS*SRPKIWNACTLHTTVTNK 31 + PD + ++ RE +ASP + + P +W+ L T V N+ Sbjct: 101 ADPDPFNGAKTIRELYEIASPNYIGKPTVPVLWDK-QLKTVVNNE 144 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,515,330 Number of Sequences: 37544 Number of extensions: 332395 Number of successful extensions: 783 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 783 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1023611560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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