Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O04
         (491 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57220.1 68418.m07149 cytochrome P450, putative similar to  C...    31   0.56 
At1g64840.1 68414.m07351 F-box family protein contains Pfam:PF00...    31   0.56 
At5g53260.1 68418.m06620 seed maturation family protein similar ...    29   1.7  
At5g53270.1 68418.m06621 seed maturation family protein similar ...    28   3.0  
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi...    28   3.9  
At2g20170.1 68415.m02358 hypothetical protein  and grail contain...    27   6.9  
At3g21750.1 68416.m02744 UDP-glucoronosyl/UDP-glucosyl transfera...    27   9.1  
At1g75460.1 68414.m08765 ATP-dependent protease La (LON) domain-...    27   9.1  
At1g31460.1 68414.m03852 expressed protein                             27   9.1  
At1g04250.1 68414.m00416 auxin-responsive protein / indoleacetic...    27   9.1  

>At5g57220.1 68418.m07149 cytochrome P450, putative similar to
           Cytochrome P450 (SP:O65790) [Arabidopsis thaliana];
           Cytochrome P450 (GI:7415996) [Lotus japonicus]
          Length = 491

 Score = 30.7 bits (66), Expect = 0.56
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 71  IFGRDYERT--ALGDAIDKASLKLLKEAYTSGEDKNVVS 181
           +FG  YE+   ALG+A+D    +LL E   +GE   +VS
Sbjct: 229 VFGHGYEKKVKALGEAMDAFLQRLLDECRINGESNTMVS 267


>At1g64840.1 68414.m07351 F-box family protein contains Pfam:PF00646
           F-box domain
          Length = 384

 Score = 30.7 bits (66), Expect = 0.56
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = -3

Query: 294 LTGDIYFAPPKRLVISSWLCLPAPSL*RDSKNIAPNGDDTTFL 166
           L GDIY   P  L     L +P+  L R SK + PNG D  FL
Sbjct: 215 LNGDIYVFDPYSL--EQTLLMPSEPL-RSSKYLIPNGSDELFL 254


>At5g53260.1 68418.m06620 seed maturation family protein similar to
           SP|P09444 Late embryogenesis abundant protein D-34 (LEA
           D-34) {Gossypium hirsutum}; contains Pfam profile
           PF04927: Seed maturation protein
          Length = 176

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 77  GRDYERTALGDAIDKASLKLLKEAYTSGEDKNVV 178
           G+D E+T LGD I +  +K+ ++   + ED   V
Sbjct: 108 GKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAV 141


>At5g53270.1 68418.m06621 seed maturation family protein similar to
           SP|P09444 Late embryogenesis abundant protein D-34 (LEA
           D-34) {Gossypium hirsutum}; contains Pfam profile
           PF04927: Seed maturation protein
          Length = 159

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 77  GRDYERTALGDAIDKASLKLLKEAYTSGEDKNVV 178
           G D E+T LGD I +  +K+ ++   + ED   V
Sbjct: 89  GEDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAV 122


>At2g26390.1 68415.m03167 serpin, putative / serine protease
           inhibitor, putative similar to phloem serpin-1
           [Cucurbita maxima] GI:9937311; contains Pfam profile
           PF00079: Serpin (serine protease inhibitor)
          Length = 389

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +2

Query: 107 DAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAGKQSQEEITNLL 265
           + + + + K+++    +G   NVV SP+    LLSL   G+   ++EEI + L
Sbjct: 12  NVVARLAKKVIETDVANGS--NVVFSPMSINVLLSLIAAGSNPVTKEEILSFL 62


>At2g20170.1 68415.m02358 hypothetical protein  and grail contains
           Pfam profile PF03080: Arabidopsis proteins of unknown
           function
          Length = 401

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 89  ERTALGDAIDKASLKLLKEAYTSGEDKNVVSSPLGAMFLLSLYREGAG 232
           +RT L D I    LK L   YT+ +DK+ ++       +   YR+  G
Sbjct: 120 KRTTLEDLIQIQRLKYLGVKYTTSKDKDFLNMTGRHFAIAEYYRDNYG 167


>At3g21750.1 68416.m02744 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 473

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 338 DFFTMANKMYVGNQYTLNEWFTITARQYESEIDTIDFKDTKKAADI 475
           +F   A   Y  N   L   F + +   E E+D  +FKDT+   D+
Sbjct: 122 EFNLSAYIFYTSNASYLGLQFHVQSLYDEKELDVSEFKDTEMKFDV 167


>At1g75460.1 68414.m08765 ATP-dependent protease La (LON)
           domain-containing protein weak similarity to SP|P36774
           ATP-dependent protease La 2 (EC 3.4.21.53) {Myxococcus
           xanthus}; contains Pfam profile PF02190: ATP-dependent
           protease La (LON) domain
          Length = 278

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 117 TKPP*NSLRKRIHPVKTRMWCRLH-WVRCSYCPSTEKEPVNKAKKRSPI 260
           +KPP +SLR     V  R  C+L+   RCS    +EK    K+ K   I
Sbjct: 21  SKPPFHSLRSLSPTVDNRRRCKLNSSFRCSSSSFSEKHHNAKSPKSDDI 69


>At1g31460.1 68414.m03852 expressed protein
          Length = 301

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 210 PSTEKEPVNKAKKRSPISW 266
           PST+ EP  K+K +S  SW
Sbjct: 183 PSTDSEPEKKSKPKSKSSW 201


>At1g04250.1 68414.m00416 auxin-responsive protein / indoleacetic
           acid-induced protein 17 (IAA17) Identical to SP|P93830
           Auxin-responsive protein IAA17 (Indoleacetic
           acid-induced protein 17) {Arabidopsis thaliana}; ESTs
           gb|H36782 and gb|F14074 come from this gene
          Length = 229

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 389 NEWFTITARQYESEIDTIDFKDTKKAADIVNQW 487
           N + + T  ++  E   IDF + +K  D+VN W
Sbjct: 143 NMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSW 175


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,641,053
Number of Sequences: 28952
Number of extensions: 262162
Number of successful extensions: 637
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)