Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O03
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   4.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   4.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 GSHGKTYANKCSLECTQKI 444
           G H     N C +EC+ K+
Sbjct: 494 GFHNPFTCNMCGVECSDKV 512


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 180 YSVTALPPPLCICGKIYSPVCGSDGKTY 263
           Y ++A P P     +IY PV      TY
Sbjct: 334 YQISAQPTPSQSPNQIYQPVTNLTNLTY 361


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 394 HGKTYANKCSLECTQKIIPSL 456
           +G+   NKC   C  ++ PS+
Sbjct: 51  NGEVAVNKCEGSCKSQVQPSV 71


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 201 PPLCICGKIYSPVCGSDGKTYENPCEFYCEKDKT 302
           PP+      YSPV  SD +  E     Y  K K+
Sbjct: 34  PPIYEPSCQYSPVSNSDSENSEVSSNSYTPKIKS 67


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 421 NICWRKFFRESHRRGH 374
           +IC + F R+ H R H
Sbjct: 111 DICGKAFRRQDHLRDH 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,118
Number of Sequences: 336
Number of extensions: 2404
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)