Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O03
         (470 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              33   0.001
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    24   0.71 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.8  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   6.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 33.5 bits (73), Expect = 0.001
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 216 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKN 329
           C + + PVC S+GK Y N CE +  +   HS  ++ K+
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTKS 145



 Score = 32.7 bits (71), Expect = 0.002
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 361 CTLEYAPVCGSHGKTYANKCSL 426
           C   + PVC S+GK YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 433 CIPVNICWRKFFRESHRRGHIPRYSSKGM 347
           C+  +I W KF +E   R   P Y   G+
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGV 69


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = +3

Query: 267 NPCEFYCEKDKTHSNMTIVKNTACEVGIPLLLYLGICPR--LWLSRKN 404
           +P +     +   S  T V+  + E GIP     G C R  + LSR N
Sbjct: 521 SPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSN 568


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 216 CGKIYSPVCGSDGKTYENPCEFYCEKDKT 302
           C   Y      DG +Y N  E  C +D++
Sbjct: 230 CHSRYEDSRHEDGNSYRNDGERSCSRDRS 258


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 219 RKYITAVAELLPSILAQRRSEEYRVYSFCV 130
           RK  T    ++ S   Q++SEE  +   CV
Sbjct: 795 RKTATTTQPVISSRKEQKKSEEKNINDHCV 824


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = +1

Query: 352 PCYCTLEYAPVCGSHGKTYANKCSLE 429
           PCYCT E   +  +  +       L+
Sbjct: 1   PCYCTCEKCKITANRQQVMRQNMKLK 26


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 202 RRYVFAEKSIVPSAGQM 252
           RR +FA + ++ SAG +
Sbjct: 308 RRIIFARREVILSAGSV 324


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 205 GGGRAVTEYISAAAIRRIPSLFILCLNIIGTYLEF 101
           G G  V  ++S  ++R   +LF++ L I    + F
Sbjct: 69  GNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMF 103


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 376 APVCGSHGKTYANK 417
           A +CG+ G +YA +
Sbjct: 12  AAICGAQGASYAGR 25


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 376 APVCGSHGKTYANK 417
           A +CG+ G +YA +
Sbjct: 12  AAICGAQGASYAGR 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,948
Number of Sequences: 438
Number of extensions: 2776
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)