Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O02
         (116 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   0.88 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    19   6.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    19   6.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
          protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 0.88
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 58 RFPSGPAVMRRSKSVTS 8
          R+PSGP +  RS + T+
Sbjct: 36 RYPSGPELSDRSAAYTN 52


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory
          receptor candidate 56 protein.
          Length = 358

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 80 FSDDCEVEVSIRP 42
          F D C+V  +I P
Sbjct: 10 FKDPCDVYTAIHP 22


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory
          receptor candidate 21 protein.
          Length = 386

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 80 FSDDCEVEVSIRP 42
          F D C+V  +I P
Sbjct: 10 FKDPCDVYTAIHP 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,496
Number of Sequences: 336
Number of extensions: 199
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 19
effective length of database: 116,201
effective search space used:  2207819
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)