BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_O02 (116 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0338 + 2665412-2665564,2665647-2665766,2666344-2666397,266... 27 1.6 07_03_1192 + 24698355-24698433,24699312-24699391,24700027-247004... 25 6.5 >05_01_0338 + 2665412-2665564,2665647-2665766,2666344-2666397, 2666583-2666660,2667608-2667652,2668327-2668434, 2668629-2668706,2669352-2669457,2669622-2669680, 2670465-2670564,2670932-2671011,2671132-2671188, 2671321-2671424,2671799-2671886,2671971-2672056, 2672140-2672185,2672246-2672317,2672541-2672601, 2672692-2672936 Length = 579 Score = 27.5 bits (58), Expect = 1.6 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -1 Query: 107 VFTNVTDVFFSDDCEVEVSIRPSC 36 VFT +T+ F ++CE + +R +C Sbjct: 429 VFTPLTEPFIEEECEETLGVRSTC 452 >07_03_1192 + 24698355-24698433,24699312-24699391,24700027-24700483, 24700641-24700794,24700878-24701155,24701225-24701517 Length = 446 Score = 25.4 bits (53), Expect = 6.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +3 Query: 24 DRRITAGPDGNLYFTIVTKED 86 D +TAGPDGN+ ++ K+D Sbjct: 363 DLLMTAGPDGNVQSELLFKKD 383 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,306,354 Number of Sequences: 37544 Number of extensions: 20322 Number of successful extensions: 42 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 14,793,348 effective HSP length: 19 effective length of database: 14,080,012 effective search space used: 267520228 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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