Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O01
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0560 + 19479597-19480667 40 0.002
07_03_0559 + 19475893-19476783 40 0.002
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 34 0.057
01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557 33 0.13
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 32 0.30
08_02_0329 - 15833124-15833825 31 0.40
01_06_1153 - 34942608-34942975,34943082-34943330,34943516-349436... 30 0.93
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148... 29 1.6
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 29 2.1
06_03_1326 - 29355467-29355817 29 2.1
03_04_0055 + 16891212-16891848,16893166-16893206 29 2.1
01_06_1198 + 35341375-35341635,35341750-35341953,35342151-353427... 29 2.1
07_03_0558 + 19461369-19462448 28 3.7
06_03_0500 + 21470681-21470952,21471049-21471089,21472322-214724... 28 3.7
04_04_1107 - 30954647-30954769,30955052-30955141,30955309-309556... 28 3.7
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 28 3.7
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 28 5.0
07_03_1228 - 25009736-25010965 28 5.0
07_03_1175 - 24555965-24556117,24557809-24558264,24558270-245584... 28 5.0
03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411 28 5.0
02_02_0374 + 9538478-9540385 28 5.0
10_08_0218 - 15967064-15967906 27 6.5
09_04_0583 - 18699265-18699459,18701579-18701827,18703283-187036... 27 6.5
08_02_1313 - 26065192-26065491,26065603-26065857,26067611-260677... 27 6.5
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 27 6.5
06_02_0125 + 12122812-12122911,12123647-12123993 27 6.5
02_02_0257 - 8366452-8367087 27 6.5
12_01_0130 + 977181-977828 27 8.7
>07_03_0560 + 19479597-19480667
Length = 356
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3
Query: 93 NFGLSGHGPSGFGHRPSGFGHGPSGFVH 176
+F G GP GFGH P GFG GP GF H
Sbjct: 27 HFDDDGFGPGGFGHGPKGFGRGP-GFGH 53
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 123 GFGHRPSGFGHGPSGFVHG 179
GFG P GFGHGP GF G
Sbjct: 32 GFG--PGGFGHGPKGFGRG 48
>07_03_0559 + 19475893-19476783
Length = 296
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3
Query: 93 NFGLSGHGPSGFGHRPSGFGHGPSGFVH 176
+F G GP GFGH P GFG GP GF H
Sbjct: 27 HFDDDGFGPGGFGHGPKGFGRGP-GFGH 53
Score = 30.7 bits (66), Expect = 0.70
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 123 GFGHRPSGFGHGPSGFVHG 179
GFG P GFGHGP GF G
Sbjct: 32 GFG--PGGFGHGPKGFGRG 48
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 34.3 bits (75), Expect = 0.057
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = +3
Query: 72 QSGLSPGNFG-LSGHGPSGFGHR----PSGF-GHGPSGFVHG 179
+ G +PG+FG G GP GFG R P GF G G G HG
Sbjct: 1096 REGAAPGSFGGRGGRGPGGFGGRGGGSPGGFGGRGGRGDSHG 1137
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +3
Query: 87 PGNFGLSGHGPSGFGHR--PSGFG--HGPSGF 170
PG++G GP GFG R P GFG GP GF
Sbjct: 1017 PGSYGGIRDGPGGFGGRDGPGGFGGRDGPGGF 1048
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Frame = +3
Query: 87 PGNFGLSGHGPSGFGHR--PSGFG--HGPSGF 170
PG F + GP GFG R P GFG P GF
Sbjct: 1054 PGGF-IGREGPGGFGGREGPVGFGGQESPGGF 1084
>01_06_0709 - 31367152-31367532,31367762-31368035,31368474-31370557
Length = 912
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/68 (33%), Positives = 27/68 (39%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQSLA 260
L+ GNF G G G G R SG G + T E DG+ D EH A +
Sbjct: 11 LAEGNFAALGPGGGGGGRRRSG-SFGLKRMSRVMTVPGTLSELDGEDDSEHAATNSVASD 69
Query: 261 VGELEEGD 284
V GD
Sbjct: 70 VPSSVAGD 77
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHR-PSGFGHG-PSGFVHGG 182
+ G G G G GP GFG P GFG G P GF GG
Sbjct: 9 RGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGG 47
>08_02_0329 - 15833124-15833825
Length = 233
Score = 31.5 bits (68), Expect = 0.40
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 99 GLSGHGP-SGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQSLAVG 266
G SG G G G R SG G G G V GG + E E+ + A+ + + AVG
Sbjct: 95 GGSGEGGVGGVGDRESGGGAGGGGGVGGGQLARAEAEARLEASPAEAAKVETAAAVG 151
>01_06_1153 -
34942608-34942975,34943082-34943330,34943516-34943625,
34944698-34944771,34945237-34945306,34945848-34945947,
34946045-34946120,34946572-34946646,34947067-34947156,
34947238-34947354,34947457-34947567,34947649-34947788,
34947962-34948043,34948224-34948303,34948938-34949046,
34949295-34949417,34949972-34950044,34950338-34950489,
34951029-34951127,34952258-34952383
Length = 807
Score = 30.3 bits (65), Expect = 0.93
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNIQTTEEES 209
L PGN GL G S + G HGP + N Q + S
Sbjct: 557 LKPGNAGLLGWAMSSLTQKGKGSDHGPVSSANASNSQISATSS 599
>03_05_0377 +
23613181-23613342,23614469-23614501,23614606-23614879,
23615105-23615585,23616174-23616846
Length = 540
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 198 EEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIP 302
E++ DG+ + E +A E VG LEE DL +P
Sbjct: 12 EDDGDGEEEVEWLAMEADEDDVGLLEEDDLHLRLP 46
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G G G+G SGFG SG G G SGF G
Sbjct: 561 GRSGGGGYGDSGFG--SSGGGSGRSGFGRSG 589
>06_03_1326 - 29355467-29355817
Length = 116
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G G G G G SG GH G G G SG HGG
Sbjct: 46 GGGEGGSGKYGGGYSG-GHAGGGGGAGKSGGYHGG 79
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 114 GPSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHD 224
G GFGH P G G G S G+ + +E+ D D
Sbjct: 191 GRGGFGHHPGGGGGGSSS--SSGHDEDEDEDEDEDED 225
>01_06_1198 +
35341375-35341635,35341750-35341953,35342151-35342737,
35342825-35342986,35343096-35343549
Length = 555
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 114 GPSGFGHRPSGF-GHGPSGFVHGGNI---QTTEEESDGQHDFEHVAQEQQSLAV 263
GP + RP GF G GP G V GG+ + +++ G + +H Q++Q+ A+
Sbjct: 482 GPQPYALRPDGFGGQGPFGGVVGGSSFGGFSGFDDARGSYMSQHQQQQRQNDAM 535
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
GL G GL G GFG G G G SG V GG
Sbjct: 65 GLGGGGGGLGGGHGGGFG-GGGGLGGGASGGVGGG 98
>06_03_0500 +
21470681-21470952,21471049-21471089,21472322-21472485,
21472577-21472679,21472806-21472975,21473766-21474239
Length = 407
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +3
Query: 90 GNFGLSGHGPS-GFGHRP---SGFGHGPSGFVHGG 182
G+ G +G+G G+G P SGFG G G ++GG
Sbjct: 316 GSTGYAGYGRGYGYGGNPAFGSGFGSGYGGSMYGG 350
>04_04_1107 -
30954647-30954769,30955052-30955141,30955309-30955617,
30955732-30955842,30955945-30956379,30956452-30956610,
30957044-30957994,30959016-30959483
Length = 881
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 153 HGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQD 314
H P GG++Q + + + D +HV + +QS + ++ D +D ++++
Sbjct: 822 HAPGSSAAGGDVQQDQSKHQDESDKQHV-ERRQSARHHDDDDDDDDEDYEVEEE 874
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Frame = +3
Query: 108 GHGPSGFG----------HRPSGFGHGPSGFVHGGNIQ---TTEEESDGQHDFEHVAQEQ 248
G+G SGFG HRPS GHGP GG + T E D H A E+
Sbjct: 103 GYGASGFGDGIVRREEGEHRPSERGHGPRQPYRGGGRRGGYTGGEAGDESGRAPHRAYER 162
Query: 249 QS 254
+S
Sbjct: 163 RS 164
>07_03_1562 -
27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 168 FVHGGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDL 287
FV ++ E + DG D E + Q +AVG L DL
Sbjct: 5 FVFPSTLRDLERDGDGGGDDEPALRPQNPVAVGALRAADL 44
>07_03_1228 - 25009736-25010965
Length = 409
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQ 338
GG + EEE + + + E A+E++ + EE + +D I++D + E E+
Sbjct: 332 GGEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEEED--IEEDENEEEEEE 383
>07_03_1175 -
24555965-24556117,24557809-24558264,24558270-24558436,
24558468-24558756,24559620-24559726,24559841-24559909,
24560001-24560109
Length = 449
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 11/47 (23%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFG----HRPSGFG-------HGPSGFVHGGN 185
G+S G FG GH G+ R SGFG +G G HG N
Sbjct: 339 GISSGQFGAVGHSNGGYSTSNFSRGSGFGANSGGSSNGQYGAAHGNN 385
>03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411
Length = 1311
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 174 HGGNIQTTEEESDGQHDFEHVAQEQQSLAVG-ELEEGDLGQDIPIQQDSRQSEH--EQQA 344
HG N +TT + G+ EH Q+ Q + + LE + GQ + + SE+ E+
Sbjct: 1173 HGTNPRTTHIVACGRRPLEHDLQDNQVVLLDWVLENWNRGQILDVVDPRLSSEYVAEEAN 1232
Query: 345 GIKKM*CLCVK 377
+ K+ LC++
Sbjct: 1233 LVLKLGLLCLQ 1243
>02_02_0374 + 9538478-9540385
Length = 635
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 HLLQARQLQDFVVLALHVRNHADHRFPLQWFVYYHHVQIHSAHVQIHS 139
+L A Q+++ V L N A + F HVQ HSA+ Q+HS
Sbjct: 570 YLSWASQIKNMVKNLLRQANRASN-FDTSILEMNTHVQKHSAYTQVHS 616
>10_08_0218 - 15967064-15967906
Length = 280
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSG-FVHGG 182
G +G SGHG SG G+ +G +GP G + GG
Sbjct: 201 GQYGGSGHG-SGSGYGQAG-SYGPGGAYAQGG 230
>09_04_0583 -
18699265-18699459,18701579-18701827,18703283-18703669,
18703793-18703870,18704082-18704141,18704299-18704343,
18704506-18704718,18704867-18704932
Length = 430
Score = 27.5 bits (58), Expect = 6.5
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +3
Query: 87 PGNFGLSGHGPSGFG---HRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQSL 257
PG+ GL G G SG G G G G G + E Q + + E ++
Sbjct: 159 PGSGGLIGEGGSGKGVLLGGIDGVGGGGGGGLSSEAAMFDVEYGRWQEEHHRLMYELRAA 218
Query: 258 AVGELEEGDLGQDIPIQQDSRQSEHEQQAGIK 353
+L EG+L + +S + H++ A IK
Sbjct: 219 LQQQLPEGEL----QVYVESCLAHHDEVAAIK 246
>08_02_1313 -
26065192-26065491,26065603-26065857,26067611-26067718,
26068637-26068738
Length = 254
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 246 VLALHVRNHADHRFPLQWFVYYHHV 172
+ AL +R DH++ + W Y+H V
Sbjct: 156 IFALFLRPKKDHKYRIYWNAYHHSV 180
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQ 248
GLS G G+ GHG S P F G V GG + S G + E E+
Sbjct: 137 GLSSGQGGVRGHGASMSHSGPPAFNFG----VFGGGRRAGASSSQGTNVSEDDGNEE 189
>06_02_0125 + 12122812-12122911,12123647-12123993
Length = 148
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 78 GLSPGNFGLSG-HGPSGFGHRPSGFGHGPSGFVHGG 182
G G +G G +G G+GH G G+G G+ H G
Sbjct: 55 GAHGGGYGYGGGYGGGGYGHPGYGGGYG-GGYGHPG 89
>02_02_0257 - 8366452-8367087
Length = 211
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHR--PSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQSLAV 263
G GL H G R P+ G G + +I E+ G+ + A + ++ +
Sbjct: 98 GGDGLPSHLRDGVQPRETPTVRGGGGARVATADDIPAYEQPPAGEGEGGAAAAPECAVCL 157
Query: 264 GELEEGDLGQDIP 302
GE+E+G++ + +P
Sbjct: 158 GEVEKGEMAKRLP 170
>12_01_0130 + 977181-977828
Length = 215
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
++G N G+G GFG RP G +G + F
Sbjct: 162 KNGGHNNNRNSGGNGGGGFGGRPGGQNNGSNSF 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,057,775
Number of Sequences: 37544
Number of extensions: 202829
Number of successful extensions: 825
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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