Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_O01
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 36 0.022
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 36 0.022
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 36 0.022
U88315-7|AAL16314.1| 546|Caenorhabditis elegans Nematode astaci... 30 0.84
U88315-6|AAB42372.1| 517|Caenorhabditis elegans Nematode astaci... 30 0.84
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 30 0.84
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 1.5
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 1.9
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 1.9
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 2.6
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 2.6
AF039047-11|AAB94230.1| 354|Caenorhabditis elegans Prion-like-(... 29 2.6
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 2.6
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50857-6|CAA90720.1| 283|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z50806-6|CAA90692.1| 283|Caenorhabditis elegans Hypothetical pr... 28 3.4
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 28 3.4
AF039050-14|AAC47928.1| 69|Caenorhabditis elegans Neuropeptide... 28 3.4
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 27 5.9
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 5.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 5.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 5.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 5.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 5.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 27 5.9
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 27 7.8
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 27 7.8
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 27 7.8
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 27 7.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 27 7.8
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 27 7.8
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 27 7.8
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 27 7.8
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 27 7.8
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 27 7.8
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 7.8
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 7.8
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 27 7.8
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 35.5 bits (78), Expect = 0.022
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHG---GNIQTTEEESDGQHDFEHVAQE 245
+G GN G SG G GFG +GFG G G G N ++ +D +E
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 246 QQSLAVGELEE-GDLGQDIPIQQDSRQSEHEQQAG 347
++ ++ G +D P ++ R+ + +G
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSG-FG---HGPSGFVHGGN 185
SGL+ G FG + SGFG SG FG G SGF GGN
Sbjct: 200 SGLTNG-FGSGNNHESGFGGGKSGGFGGGNSGGSGFGSGGN 239
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 35.5 bits (78), Expect = 0.022
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHG---GNIQTTEEESDGQHDFEHVAQE 245
+G GN G SG G GFG +GFG G G G N ++ +D +E
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 246 QQSLAVGELEE-GDLGQDIPIQQDSRQSEHEQQAG 347
++ ++ G +D P ++ R+ + +G
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSG-FG---HGPSGFVHGGN 185
SGL+ G FG + SGFG SG FG G SGF GGN
Sbjct: 200 SGLTNG-FGSGNNHESGFGGGKSGGFGGGNSGGSGFGSGGN 239
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 35.5 bits (78), Expect = 0.022
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHG---GNIQTTEEESDGQHDFEHVAQE 245
+G GN G SG G GFG +GFG G G G N ++ +D +E
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 246 QQSLAVGELEE-GDLGQDIPIQQDSRQSEHEQQAG 347
++ ++ G +D P ++ R+ + +G
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSG 427
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSG-FG---HGPSGFVHGGN 185
SGL+ G FG + SGFG SG FG G SGF GGN
Sbjct: 200 SGLTNG-FGSGNNHESGFGGGKSGGFGGGNSGGSGFGSGGN 239
>U88315-7|AAL16314.1| 546|Caenorhabditis elegans Nematode astacin
protease protein9, isoform b protein.
Length = 546
Score = 30.3 bits (65), Expect = 0.84
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 114 GPSGFGHRPSGFGHGPSGF 170
GP GF P GF GP GF
Sbjct: 32 GPDGFNRGPGGFHRGPDGF 50
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNI 188
Q+G G GP GF P GFG P G V G++
Sbjct: 25 QNGRFRGGPDGFNRGPGGFHRGPDGFGGDPRGGVDLGHL 63
>U88315-6|AAB42372.1| 517|Caenorhabditis elegans Nematode astacin
protease protein9, isoform a protein.
Length = 517
Score = 30.3 bits (65), Expect = 0.84
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 114 GPSGFGHRPSGFGHGPSGF 170
GP GF P GF GP GF
Sbjct: 32 GPDGFNRGPGGFHRGPDGF 50
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNI 188
Q+G G GP GF P GFG P G V G++
Sbjct: 25 QNGRFRGGPDGFNRGPGGFHRGPDGFGGDPRGGVDLGHL 63
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 30.3 bits (65), Expect = 0.84
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 72 QSGLSPG--NFGLSGHGPSGFGHRPSGFGHGPSGFVHG 179
Q GLS G +FG SG+ PS FG PSG P+G +G
Sbjct: 664 QPGLSDGPLSFG-SGNAPSEFGPVPSGSFGSPAGSNNG 700
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHG---PSGFVHGGNIQTTEEESDG 215
GNFG SG G S FG G G G PSGF GG+ E S G
Sbjct: 843 GNFGGSGGGGS-FGGSGGGGGFGGVKPSGF--GGSRNNAEPTSSG 884
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHRPSGF-GHGPS-GFVHGGNIQTTEEESDGQHDFEHVAQE 245
Q G G SG+ P GF + GF G G GF G + G Q
Sbjct: 89 QGGFGGQQGGFSGNSPGGFEGQQGGFGGFGQQVGFGGQGGFGGNSQGGFGGQQSGFGGQG 148
Query: 246 QQSLAVGELEEGDLGQDIPIQQDSRQS 326
QQS G G+ P Q+ S+QS
Sbjct: 149 QQS-GFGGGFGGNSQNGFPAQRPSQQS 174
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSG----FGHGPSGF 170
+PG++G GP GFG P G +G P+GF
Sbjct: 419 APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQS 254
+G+ N G SG G SG G G SG + GG Q ++ Q Q Q+
Sbjct: 3302 TGMGQTNMGQSGMGQSGMGQT----GMSRSG-LGGGIGQQGQQSQQPQQPQVSQQQNQRG 3356
Query: 255 LAVG-ELEEGDLGQDIPIQQDSRQSEHEQQ 341
+ G +L GQ Q S+ S+ +QQ
Sbjct: 3357 MNPGAQLPPYSTGQQQHQPQQSQISQQQQQ 3386
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHG 179
G+FG G G GFG GFG G GF G
Sbjct: 478 GSFG-GGGGGGGFGGGGGGFGGGGGGFGSG 506
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
G G G +GFG FG G SGF GG+
Sbjct: 120 GGSGGFGGSATGFGSGGGSFGGGNSGFGEGGH 151
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
SG G + G GFG +GFG G F GGN
Sbjct: 108 SGFGSGEKSSAFGGSGGFGGSATGFGSGGGSF-GGGN 143
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
G G G +GFG FG G SGF GG+
Sbjct: 120 GGSGGFGGSATGFGSGGGSFGGGNSGFGEGGH 151
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
SG G + G GFG +GFG G F GGN
Sbjct: 108 SGFGSGEKSSAFGGSGGFGGSATGFGSGGGSF-GGGN 143
>AF039047-11|AAB94230.1| 354|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 51
protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGD-LGQDIPIQQDSRQSEHE 335
GG + + E + D + + + + GE+E+GD + ++ P+ + QS+ E
Sbjct: 248 GGGMSDSSSEDEPDDDDDPLRRIADRMGNGEVEDGDQVAEEEPLNSEDDQSDDE 301
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
G G G +GFG FG G SGF GG+
Sbjct: 120 GGSGGFGGSATGFGSGGGSFGGGNSGFGEGGH 151
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGGN 185
SG G + G GFG +GFG G F GGN
Sbjct: 108 SGFGSGEKSSAFGGSGGFGGSATGFGSGGGSF-GGGN 143
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical protein
F39B2.4b protein.
Length = 1589
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSG-FGHRPS--GFGHGPSGFVHGGNIQTTEEESDGQHDF-EHVAQEQ 248
+ P G H PSG GH P G GH H + Q + +++ +Q
Sbjct: 1497 MGPQYPGAVFHHPSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPAPMHTMNPMMQNMTPQQ 1556
Query: 249 QSLAVGELEEGDLGQDIPIQQDSRQSEHEQQ 341
Q L + +L++ Q QQ +H+QQ
Sbjct: 1557 QYLYMQQLQQHQQHQQYMQQQQQHHHQHQQQ 1587
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical protein
F39B2.4a protein.
Length = 1587
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSG-FGHRPS--GFGHGPSGFVHGGNIQTTEEESDGQHDF-EHVAQEQ 248
+ P G H PSG GH P G GH H + Q + +++ +Q
Sbjct: 1495 MGPQYPGAVFHHPSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPAPMHTMNPMMQNMTPQQ 1554
Query: 249 QSLAVGELEEGDLGQDIPIQQDSRQSEHEQQ 341
Q L + +L++ Q QQ +H+QQ
Sbjct: 1555 QYLYMQQLQQHQQHQQYMQQQQQHHHQHQQQ 1585
>Z69386-1|CAA93430.1| 241|Caenorhabditis elegans Hypothetical
protein ZK596.1 protein.
Length = 241
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
Q G GN G G GFG GF G G GG
Sbjct: 173 QGGFPGGNQGGFGGNQGGFGGNQGGFPFGNQGGNQGG 209
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
S PG G G+G GFG GFG GPS GG
Sbjct: 55 SNYGPGRGGFGGNG--GFGGN-GGFGGGPSYGGRGG 87
>Z50857-6|CAA90720.1| 283|Caenorhabditis elegans Hypothetical
protein M79.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 305 DGYILS*ITFFKLANCKTLLFLRYMFEIMLTIAFLFSGLYITTMYKST 162
D L+ + FF LA+ LF++YM +L+I F F G IT Y ST
Sbjct: 19 DSVWLNKLCFFPLASFVFFLFIKYM---LLSI-FYFYGSCITLTYFST 62
>Z50806-6|CAA90692.1| 283|Caenorhabditis elegans Hypothetical
protein M79.2 protein.
Length = 283
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 305 DGYILS*ITFFKLANCKTLLFLRYMFEIMLTIAFLFSGLYITTMYKST 162
D L+ + FF LA+ LF++YM +L+I F F G IT Y ST
Sbjct: 19 DSVWLNKLCFFPLASFVFFLFIKYM---LLSI-FYFYGSCITLTYFST 62
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSG-FGHRPS--GFGHGPSGFVHGGNIQTTEEESDGQHDF-EHVAQEQ 248
+ P G H PSG GH P G GH H + Q + +++ +Q
Sbjct: 1495 MGPQYPGAVFHHPSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPAPMHTMNPMMQNMTPQQ 1554
Query: 249 QSLAVGELEEGDLGQDIPIQQDSRQSEHEQQ 341
Q L + +L++ Q QQ +H+QQ
Sbjct: 1555 QYLYMQQLQQHQQHQQYMQQQQQHHHQHQQQ 1585
>AF039050-14|AAC47928.1| 69|Caenorhabditis elegans
Neuropeptide-like protein protein30 protein.
Length = 69
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G G +G G G G+G G+G G G +GG
Sbjct: 30 GRGYGGYGGYGRGYGGYGRGYGGYGRGMWGRPYGG 64
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 87 PGNFGLSGHG--PSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQ 251
PG+ L+ HG S H PS V NI + G +DFEH+ EQ+
Sbjct: 557 PGSSSLNRHGIGEETSDGEESDEPHHPS--VAPSNIVRPRKSKKGPYDFEHLTVEQE 611
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G S G FG G G G G R S FG G G GG
Sbjct: 24 GGSRGGFGGGGRGGYGGGDRGS-FGGGDRGGFRGG 57
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 87 PGNFGLSGHG--PSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQHDFEHVAQEQQ 251
PG+ L+ HG S H PS V NI + G +DFEH+ EQ+
Sbjct: 557 PGSSSLNRHGIGEETSDGEESDEPHHPS--VAPSNIVRPRKSKKGPYDFEHLTVEQE 611
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 72 QSGLSPGNFGLSGHGPSGF-GHRPSG-FGHGPSGFVHGG 182
+SG G G GHG G P G GHG SG GG
Sbjct: 245 RSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGG 283
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 75 SGLSPGNFGLSGHGPSGF-GHRPSG-FGHGPSGFVHGG 182
SG G G GHG G P G GHG SG GG
Sbjct: 295 SGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGG 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 70 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 97
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 128 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 155
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 91 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 118
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 149 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 176
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 76 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 103
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 84 SPGNFGLSGHGPSGFGHRPSGFGHGPSGF 170
SP FG P GFG GFG G +GF
Sbjct: 134 SPPPFGGFSGAPQGFGGNQGGFG-GQTGF 161
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 90 GNFGLSGHGPSG-FGHRPSGFGHGPSGFVHGGN 185
G +G G+G G FG G G+G G+ GG+
Sbjct: 92 GGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGD 124
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 78 GLSPGNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G G G G+G G+G G G GP G+ GG
Sbjct: 121 GGGDGGGGYGGYGGGGYG----GMGGGPGGYGMGG 151
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1720 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1775
Query: 357 M 359
+
Sbjct: 1776 L 1776
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1705 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1760
Query: 357 M 359
+
Sbjct: 1761 L 1761
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1753 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1808
Query: 357 M 359
+
Sbjct: 1809 L 1809
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1712 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1767
Query: 357 M 359
+
Sbjct: 1768 L 1768
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 90 GNFGLSGHGPSGFGHRPSGFGHGPSGFVHGG 182
G G G G GFG GFG G G GG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGNYGGG 84
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1712 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1767
Query: 357 M 359
+
Sbjct: 1768 L 1768
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1720 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1775
Query: 357 M 359
+
Sbjct: 1776 L 1776
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1753 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1808
Query: 357 M 359
+
Sbjct: 1809 L 1809
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1705 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1760
Query: 357 M 359
+
Sbjct: 1761 L 1761
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +3
Query: 177 GGNIQTTEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQAGIKK 356
G NI+ +SD + + +E + LA+ ++EG+L ++ ++ + GIK+
Sbjct: 1705 GENIENEITKSDD----DEIVEEHEPLAIEHVKEGELDEEEETEEGPTTQIPDGHGGIKR 1760
Query: 357 M 359
+
Sbjct: 1761 L 1761
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSGFGHRPSGFG 152
L P FG S S FG + GFG
Sbjct: 457 LPPAGFGASSSNESAFGQQSKGFG 480
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 81 LSPGNFGLSGHGPSGFGHRPSGFG 152
L P FG S S FG + GFG
Sbjct: 457 LPPAGFGASSSNESAFGQQSKGFG 480
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 90 GNFGLSG-HGPSGFGHRPSGFGHGPSGFVHGGNIQTTEEESDGQH 221
GN G G GP G P G+G G N + ++ DG H
Sbjct: 157 GNDGAPGLRGPDGHPGHPGNPGYGGEPGAPGNNGEPGDKGRDGSH 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,911,478
Number of Sequences: 27780
Number of extensions: 185285
Number of successful extensions: 1015
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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