Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_O01
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    27   0.11 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   7.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 195 TEEESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQQ 341
           TE++   Q   +H  Q+QQ+  V   ++    Q    QQ  +Q + +QQ
Sbjct: 412 TEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQ 460


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +3

Query: 204 ESDGQHDFEHVAQEQQSLAVGELEEGDLGQDIPIQQDSRQSEHEQ 338
           ES   +  +H  +   S  + +L      +D+PI Q      H Q
Sbjct: 36  ESSASNSPDHYERFSPSTHLMDLSSPPEHRDLPIYQSHHHLHHHQ 80


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 365 TLHFFYSSLLFMFTLSGILLDGYIL 291
           +LH+  + L  +FT   +L +G ++
Sbjct: 46  SLHYLLALLYILFTFLALLGNGLVI 70


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 183 YHHVQIHSAHVQIHSV 136
           +HH+Q H  H+Q  +V
Sbjct: 141 HHHLQNHHHHLQSTAV 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,227
Number of Sequences: 438
Number of extensions: 2345
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)