Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N24
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   1.4  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   3.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 340  ERQDDRWSWGYVNSNGSGQEK-IKSTTTARTTNAVIYKSGDSS 465
            +R  D  S   V ++G      IKST++A  T  VI +SG SS
Sbjct: 979  DRNGDTKSRSPVVADGHNSTNVIKSTSSADETGGVIKRSGSSS 1021


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = +1

Query: 271 TVSPKQINTDEVHRLTFFDQLRNERQDDRWSWGYVNSNGSGQEKIKSTTTARTTNAVIYK 450
           +++P ++      R      L N  +    S  +  S+ SG+  I S  T   T+    K
Sbjct: 459 SINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHP---K 515

Query: 451 SGDSSNTTEDVNPCSPFIPP 510
           S  SS +    NP S   PP
Sbjct: 516 SSASSTSLNHSNPISSSAPP 535


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = +1

Query: 271 TVSPKQINTDEVHRLTFFDQLRNERQDDRWSWGYVNSNGSGQEKIKSTTTARTTNAVIYK 450
           +++P ++      R      L N  +    S  +  S+ SG+  I S  T   T+    K
Sbjct: 460 SINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHP---K 516

Query: 451 SGDSSNTTEDVNPCSPFIPP 510
           S  SS +    NP S   PP
Sbjct: 517 SSASSTSLNHSNPISSSAPP 536


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 510 RRDER*AWIYIFGCVTAI 457
           +RDER  WI  F  VTAI
Sbjct: 216 QRDERRKWIQCFNDVTAI 233


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 445 YKSGDSSNTTEDVNPCSPFIPPPARGFSAPGRRISEVKCYEF 570
           YK+G  +   E    C+ F+P P    +    R ++ KC  F
Sbjct: 693 YKTGPLAEANECATNCTLFVPIPVEKVTIDEER-NDNKCTFF 733


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 412 TTTARTTNAVIYKSGDSSNTTEDVN 486
           T +  T  ++ YK   S+NT E  N
Sbjct: 478 TKSTHTPKSITYKGATSANTNEMCN 502


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 539 LPGALKPRAGGGMNGEHGF 483
           LPGA  P    G +GE GF
Sbjct: 407 LPGAAGPVGPRGYDGEKGF 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,684
Number of Sequences: 2352
Number of extensions: 10143
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)