Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N19
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 278 9e-75
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 278 9e-75
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 278 9e-75
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 278 9e-75
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 219 6e-57
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 43 7e-04
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 9e-75
Identities = 127/164 (77%), Positives = 142/164 (86%)
Frame = +2
Query: 2 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 181
ISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 182 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLG 361
GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 362 RKKGAKLTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
RKKGAKLT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 9e-75
Identities = 127/164 (77%), Positives = 142/164 (86%)
Frame = +2
Query: 2 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 181
ISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 182 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLG 361
GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 362 RKKGAKLTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
RKKGAKLT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 9e-75
Identities = 127/164 (77%), Positives = 142/164 (86%)
Frame = +2
Query: 2 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 181
ISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 182 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLG 361
GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 362 RKKGAKLTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
RKKGAKLT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 278 bits (681), Expect = 9e-75
Identities = 127/164 (77%), Positives = 142/164 (86%)
Frame = +2
Query: 2 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 181
ISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDV 62
Query: 182 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLG 361
GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 63 GNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 122
Query: 362 RKKGAKLTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
RKKGAKLT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 123 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 219 bits (534), Expect = 6e-57
Identities = 111/164 (67%), Positives = 125/164 (76%)
Frame = +2
Query: 2 ISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 181
ISRD+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGG
Sbjct: 3 ISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG----------- 51
Query: 182 GNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLG 361
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLG
Sbjct: 52 --------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLG 102
Query: 362 RKKGAKLTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
RKKGAKLT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 103 RKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 146
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 42.7 bits (96), Expect = 7e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 380 LTEAEEAIINEKRSRKTAKKYLSRQRLSKVEGGLEEQF 493
LT EE I+N+KRS+K KKY R++ +K+ LEEQF
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,188,150
Number of Sequences: 237096
Number of extensions: 2055009
Number of successful extensions: 3991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3991
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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