Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N16
(539 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 7e-18
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 32 0.34
SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31) 30 1.1
SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35738| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_23918| Best HMM Match : rve (HMM E-Value=0.013) 28 4.2
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 28 5.6
SB_817| Best HMM Match : Peptidase_S28 (HMM E-Value=0) 28 5.6
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 7.4
SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/65 (61%), Positives = 55/65 (84%)
Frame = -1
Query: 482 MRYVAAYLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRG 303
MRYVAAYLLA LG +P+A D++ IL SVGIE+D E+L KVISEL+GK+V+E+I+AG+
Sbjct: 650 MRYVAAYLLATLGNNKNPSAKDIKGILDSVGIESDMERLNKVISELSGKSVDEIIQAGKS 709
Query: 302 KLSSM 288
KL+++
Sbjct: 710 KLATV 714
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 31.9 bits (69), Expect = 0.34
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 434 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 321
SP+ AD+E IL G E EK+K+ + L K +L
Sbjct: 540 SPSKADMEAILHDYGAELSEEKMKECMKALKTKKFSKL 577
>SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 434 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 321
+P+ AD++ IL G+E EK+K+ + L K +L
Sbjct: 544 TPSKADMKAILHDYGVELSEEKMKEYMKALKTKKFSKL 581
>SB_10027| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.31)
Length = 635
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 458 LAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 321
+AVL +P AD++ IL G E EK+K+ + L K +L
Sbjct: 375 IAVLVDFYTPRKADMKAILHDYGAELSEEKMKEYMKALKTKKFSKL 420
>SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 60 YSPSCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVV 173
+SP+ Y Y + N T + P + L+K + AHVV
Sbjct: 310 HSPAAYEYFVQVNSTKIPLAYPGQYFKVLMKSSSAHVV 347
>SB_35738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 434 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 321
+P+ AD++ IL G E EK+K+ + L K +L
Sbjct: 285 TPSKADIKAILHDYGAELSEEKMKEYMKALKTKKFSKL 322
>SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 446 GGKASPAAADVEKILSSVGIEADSEKL-KKVISELNGKNVEELIEAGRGKLS 294
GG+ A+ D+E IL S ++ DS + +VISE E+L E + KL+
Sbjct: 475 GGEGKKASEDLESILDSPHVDTDSRDVPPQVISETK----EKLEENSKSKLA 522
>SB_23918| Best HMM Match : rve (HMM E-Value=0.013)
Length = 1785
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 434 SPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 321
+P+ AD+ IL G E EK+K+ + L K +L
Sbjct: 909 TPSKADINVILHDYGAELSEEKMKENMKALKTKKFSKL 946
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 458 LAVLGGKASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIE 315
+A L +P+ AD++ IL G E K+K+ + L VEE++E
Sbjct: 367 IAALVVSYTPSKADIKAILHDYGAELSEGKMKEYMKAL---QVEEVLE 411
>SB_817| Best HMM Match : Peptidase_S28 (HMM E-Value=0)
Length = 826
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 479 RYVAAYLLAVLGGKASPAAADVEKILSSVGIEAD 378
R VA + V+GGKA P VE + SVG+ D
Sbjct: 774 RIVADDITGVIGGKAPPCQGKVEAV-GSVGVIGD 806
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 434 SPAAADVEKILSSVGIEADSEKLKKVI 354
+P+ AD++ IL G+E EK+K+ +
Sbjct: 416 TPSKADMKAILHDYGVELSEEKMKEAL 442
>SB_31638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1526
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -1
Query: 464 YLLAVLGGKASPAAADVEKILSSVGIEADSEKLKKV 357
+LL V GKA + E +LSSV ++ SEKL+K+
Sbjct: 1345 WLLHVNRGKAFVNSQTKETLLSSVCLQTLSEKLEKL 1380
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,836,630
Number of Sequences: 59808
Number of extensions: 166990
Number of successful extensions: 421
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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