Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N15
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    27   0.53 
AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding pr...    25   1.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   3.8  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   5.0  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   6.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.7  

>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = +3

Query: 300 KLFNDWYPTWSEEEQDRLVLAVSEMDAEFGTKLQDVMANGTEALYNGKKDFYPTYVENGE 479
           KLF  ++PT     + R + AV+ + A +   +  +     +A    ++ +Y    E G 
Sbjct: 279 KLFESYFPTPDAARKHRQICAVTRLPARYYDPITQLPYRNMQAFKILREAYYQQLEERGN 338

Query: 480 ACKED 494
               D
Sbjct: 339 TDNPD 343


>AY146738-1|AAO12098.1|  134|Anopheles gambiae odorant-binding
           protein AgamOBP28 protein.
          Length = 134

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 181 ERISYQCLQQHAGMNQTSLQLLWPACVVKINL-SACF 288
           E  +  CL+QH G+N+  L LL      K++  + CF
Sbjct: 28  EGFALGCLEQHKGLNKEHLVLLRDGDFSKVDADTKCF 64


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -3

Query: 283 KLTGLSSQHMLAIAIASW----SGSCLRAAASTGRKSSLCNSLNS 161
           K +  +S    A   A+W    SGS L + +S+ R SS CN+ +S
Sbjct: 15  KRSSSASLRSSAANFAAWLRGNSGSPLSSISSSSRNSSSCNNSSS 59


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 333  EEEQDRLVLAVSEMDAEFGTKLQDVMANGTEA 428
            EE++ +L +A SE+D  FG+ +   +  GT+A
Sbjct: 1022 EEKKKKLKVAWSEVDENFGS-IFSTLLPGTQA 1052


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 222 EPDQLAIAMASMCCEDKPV 278
           E  ++A+    +CCEDK V
Sbjct: 270 EASRIALTNLGVCCEDKQV 288


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 257 HAGHSNCKLVWFMPACC 207
           HAG+  CK+  FM A C
Sbjct: 144 HAGNVACKVFLFMRAFC 160


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 217  LRAAASTGRKSSLCNSLNSPNHWRRYLSCASEVRPGAD 104
            LR  A+   + S  +SL+SP   RR  SC        D
Sbjct: 1366 LRWNANRHNRQSKADSLDSPKKHRRNGSCPGPSNESTD 1403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,430
Number of Sequences: 2352
Number of extensions: 11396
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)