Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N15
         (546 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.7  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   6.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 180 REDFLPVLAAARRHEPDQLAI 242
           R D LP++ +A  H+PD   I
Sbjct: 227 RFDILPLILSANGHDPDYFDI 247


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 92  KSYNVSTRPNF*STAKVSPP 151
           +S + ST PNF S AK+ PP
Sbjct: 285 ESEHTST-PNFLSEAKIFPP 303


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 385 LELNYKMLWRMVQRHYTMVK 444
           ++ NY   W+++ R Y ++K
Sbjct: 83  MQQNYPYEWQLILRRYKIMK 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,319
Number of Sequences: 438
Number of extensions: 2878
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)