Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N14
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.3  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 562 FFIFVTTVRHFVNIVIFCQN 503
           FF+ +  +  F+N ++ C N
Sbjct: 139 FFVILLWISFFLNFMLHCNN 158


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 474 TIPIKLSVFVPYFSVLFVFASKTYIPSLA 388
           T+  +  VFV  F++      ++YIP L+
Sbjct: 176 TLSDRYKVFVDLFNLSTFLIPRSYIPPLS 204


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 474 TIPIKLSVFVPYFSVLFVFASKTYIPSLA 388
           T+  +  VFV  F++      ++YIP L+
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLS 364


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 474 TIPIKLSVFVPYFSVLFVFASKTYIPSLA 388
           T+  +  VFV  F++      ++YIP L+
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLS 364


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 323 KILETGTDASATNDDTTEVYFS 388
           +++  GT     + D TEVYFS
Sbjct: 79  EMIHRGTFQGDIHRDLTEVYFS 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,088
Number of Sequences: 336
Number of extensions: 2406
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)