Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N14
         (580 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45619| Best HMM Match : M (HMM E-Value=0.01)                        37   0.010
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)                   29   2.7  
SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_7061| Best HMM Match : Carn_acyltransf (HMM E-Value=2.6e-16)        27   8.4  
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  

>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
          Length = 1315

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +2

Query: 308  NGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVK 478
            N  A +++++ +DA     +N D   V  S  D I V D+ +++     +N+D  I ++ 
Sbjct: 1197 NSDAIRVMDSNSDAIRVMDSNSDAIRVMDSNSDAIRVMDSNSDEIRAMDSNSDE-IRVMD 1255

Query: 479  TNGSDVLYVLTENHDVYKVSDGGNKNEKLED 571
            +N SD + V+  N D  +V D  +   ++ D
Sbjct: 1256 SN-SDAIRVMDSNSDAIRVMDSYSDEIRVMD 1285



 Score = 34.3 bits (75), Expect = 0.073
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
 Frame = +2

Query: 245  FVEADVNDKGEKEYKGLYSLKNGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFD 415
            FV          E + +YS  N    + + + +DA     +N D   V  S  D I V D
Sbjct: 1128 FVTKATKVSNSNEIREMYS--NSDEMREMYSNSDAIRVMDSNSDAIRVMDSNSDAIRVMD 1185

Query: 416  AKTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLED 571
            + +++     +N+D+ I ++ +N SD + V+  N D  +V D  +   ++ D
Sbjct: 1186 SNSDEIRVMDSNSDA-IRVMDSN-SDAIRVMDSNSDAIRVMDSNSDAIRVMD 1235



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +2

Query: 260  VNDKGEKEYKGLYSLKNGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFDAKTNK 430
            V D    E + + S  N    +++++ +DA     +N D   V  S  D I V D+ ++ 
Sbjct: 1233 VMDSNSDEIRAMDS--NSDEIRVMDSNSDAIRVMDSNSDAIRVMDSYSDEIRVMDSNSDA 1290

Query: 431  TEKYGTNTDSLIGIVKTNGSDV 496
                G+N+D+ I ++ +N  ++
Sbjct: 1291 IRVMGSNSDA-IRVMDSNSDEI 1311


>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
          Length = 1213

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 311 GVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIG 469
           G+    +    +++A  D ++  YF AKD IY F  K    E +     ++ G
Sbjct: 84  GIVFVSINNTNESNAAVDVSSGPYFPAKDRIYSFQLKGKSKEPFSLTIQTVTG 136


>SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 520

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +2

Query: 365 DTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDG 544
           +T  +Y     G ++ +    +  + G  T   +G +  NG +++  +T +H V    DG
Sbjct: 318 ETYAIYDGGSSGCFITEGLRQQLGEDGVRTSIQLGTI--NGKEIVDTVTASHVVVTGLDG 375

Query: 545 GNKNE 559
            N  E
Sbjct: 376 NNAVE 380


>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1291

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 133 VLDKFVYE*FRRYYELLIIILSNW 62
           +LD F Y  +RR+ +LLI I++ W
Sbjct: 23  ILDVFYYPTWRRFKDLLIAIIAPW 46


>SB_7061| Best HMM Match : Carn_acyltransf (HMM E-Value=2.6e-16)
          Length = 324

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -2

Query: 174 LRGTVRLTMSYLDEYWTNSFMNSSDDTM 91
           L+   R T +Y+ E+W+N+F+++ D  +
Sbjct: 59  LKERERTTENYVTEWWSNNFLSARDSVV 86


>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 380

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 560 FHFCYHRQTLCKHRDFLSKRIEHRNRLF*LYRSNYQCSFHIFQSYLFSHRKRIY 399
           +HF  HR+   +H  F ++R   R RLF  YR      +  F      +RK++Y
Sbjct: 329 YHF--HREASRRHSTFGARRHHERRRLF-RYRQRCVKIWRTFGQPKKPYRKKVY 379


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,854,715
Number of Sequences: 59808
Number of extensions: 289547
Number of successful extensions: 690
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)