Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N14
(580 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 35 0.036
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 30 1.0
U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 3.2
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 3.2
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 27 7.3
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 27 9.6
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 27 9.6
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 27 9.6
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 27 9.6
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 27 9.6
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 27 9.6
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 35.1 bits (77), Expect = 0.036
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = +2
Query: 260 VNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEK 439
+ D G++E+ +GV + + D+ F KDG ++ K N TE
Sbjct: 489 MEDTGQEEWMNFVLEASGVTETVEKMRIAEEKEQDEERRKDFVDKDGRPMYFTKENVTEI 548
Query: 440 YG----TNTDSLIGIVKTNGSDVLYVLTENHDVYKVSD 541
YG T D + GI KT D L L N Y + D
Sbjct: 549 YGEYEATKIDLINGIYKTMSKDQLDAL--NSTGYSIMD 584
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Frame = +2
Query: 350 SATNDDTTEVYFSAKDG----IYVFDAKTNKTEKYGTNTDSL-------IGIVKT--NGS 490
S +DD +E YFS D + D + EK +SL IG+++T + +
Sbjct: 158 STISDDDSEDYFSVTDEYVSLLQEIDKEIEILEKNSAFEESLLQEKDERIGLLETQLHAA 217
Query: 491 DVLYVLTENHDVYKVSDGGNKNEKLEDVK 577
+ + V NH++YK + + + LE+++
Sbjct: 218 EAINVAKANHELYKCQEKDRRIDNLENIE 246
>U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical
protein C30G4.5 protein.
Length = 85
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 147 SYLDEYWTNSFMNSSDDTMSFSSLFSVTGAAFIN 46
S LDE W +S + SDD++ S S TG F N
Sbjct: 40 SILDEKWRSSCSDDSDDSLPVGSYIS-TGQCFFN 72
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 65 VTENNDEKLIVSSELFINEFVQYSSKYDIV 154
VT+ D + +S+LFI+ FV+ + KYD++
Sbjct: 420 VTDARDHLKMQNSKLFISSFVRDNLKYDLI 449
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 65 VTENNDEKLIVSSELFINEFVQYSSKYDIV 154
VT+ D + +S+LFI+ FV+ + KYD++
Sbjct: 420 VTDARDHLKMQNSKLFISSFVRDNLKYDLI 449
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 317 ATKILETGTDASATNDDTTEVYFSA--KDGIYVFDAKTNKTEKYGTNTDSLIGIV 475
AT + + +AS + + + ++ K G FD TN + Y TNTD GIV
Sbjct: 1501 ATPLTTSQINASTLLNSSPRFFLTSPLKFGRLTFDPNTNYSTYYFTNTDIQKGIV 1555
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 248 VEADVNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTN 427
+E + N K E+++K L NG + +TG AT+ + V ++A + +N
Sbjct: 51 LETEKNRKREQKHK---MLPNGTTSGTSDTGNQVPATSSAASSVDYTAMNAQDYLPTYSN 107
Query: 428 KTEKY 442
T Y
Sbjct: 108 TTLNY 112
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 248 VEADVNDKGEKEYKGLYSLKNGVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTN 427
+E + N K E+++K L NG + +TG AT+ + V ++A + +N
Sbjct: 51 LETEKNRKREQKHK---MLPNGTTSGTSDTGNQVPATSSAASSVDYTAMNAQDYLPTYSN 107
Query: 428 KTEKY 442
T Y
Sbjct: 108 TTLNY 112
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 120 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 16
SF SS TMS SS + T + IN N PKK+
Sbjct: 240 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 274
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 120 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 16
SF SS TMS SS + T + IN N PKK+
Sbjct: 257 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 291
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 120 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 16
SF SS TMS SS + T + IN N PKK+
Sbjct: 255 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 289
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 120 SFMNSSDDTMSFSSLFSVTGAAFINPIKNTTPKKS 16
SF SS TMS SS + T + IN N PKK+
Sbjct: 257 SFQTSSFPTMSESSEDASTISPMINSFNNFLPKKT 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,080,811
Number of Sequences: 27780
Number of extensions: 232579
Number of successful extensions: 667
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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