Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N13
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.67 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   3.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.2  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +1

Query: 151 VPT*SSNRSAPVRTERNRSPL 213
           VPT SS RS+PV+++ + SP+
Sbjct: 223 VPTKSSPRSSPVQSDVSLSPV 243


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 518 IKIGVSLNMDELKRNDCRASK 580
           IK+G+ L+ D+L+   CR  K
Sbjct: 188 IKLGIKLSNDKLEITACRLFK 208


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 513 RFHIDYHLVNA*I*NTFTCQKVLYRALHMTKL 418
           + H++YHL N      F C K  Y  ++ + L
Sbjct: 243 KHHLEYHLRNHAGSKPFQCNKCDYTCVNKSML 274


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 513 RFHIDYHLVNA*I*NTFTCQKVLYRALHMTKL 418
           + H++YHL N      F C K  Y  ++ + L
Sbjct: 1   KHHLEYHLRNHAGSKPFQCNKCDYTCVNKSML 32


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 213 QRTSVSLRSYWRRSVRTS 160
           QRTS S  +Y  RSV TS
Sbjct: 87  QRTSTSNPTYSSRSVMTS 104


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 361 LYI*RKIPLRFCSLN*ERRIPSEPAHSP 278
           L+   K P+R  +L  +R IPS    SP
Sbjct: 58  LFTHHKAPIRPVALPPKREIPSPKRSSP 85


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 247 SQL*LFMTQTLPKDFGFSPFLLAQIGSNFTLVQS*RHAF 131
           S+L  F+T+T+  +      L  Q+GS  TLV    +A+
Sbjct: 51  SELIPFLTETIYDEDEVLLALAEQLGSFITLVGGPEYAY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,528
Number of Sequences: 336
Number of extensions: 3011
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)