Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N13
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 35 0.040
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 31 0.49
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 31 0.49
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 30 1.5
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 29 3.5
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 29 3.5
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 27 8.1
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 27 8.1
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 27 8.1
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 27 8.1
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 27 8.1
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 27 8.1
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 27 8.1
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 27 8.1
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 35.1 bits (77), Expect = 0.040
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 99 LKQLKAEAARKKACLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCE 248
L +L K C H+CTN +F+P+C NG + ++CV CE
Sbjct: 102 LTKLHMGRCSSKDCNHNCTNTEFDPVC-DTNG---SVYRNLCVFQMRRCE 147
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 96 DLKQLKAEAARKKACLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKD 257
D+ A ARK C+ + K PIC ++N P ++C YNCE ++
Sbjct: 294 DIAHSGACRARKSTCITCPKDEKKIPICDNRNMTHP----TLCSFIQYNCEARN 343
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 108 LKAEAARKKACLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 287
+K + + C + C +V P+CA+ NGE +F + C M +CE K ++ G C
Sbjct: 383 VKPDRTAECECPNRCEDV-MRPVCAT-NGE---TFDNECEMKKKSCETKSMIKVKHQGTC 437
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 31.5 bits (68), Expect = 0.49
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 108 LKAEAARKKACLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGEC 287
+K + + C + C +V P+CA+ NGE +F + C M +CE K ++ G C
Sbjct: 391 VKPDRTAECECPNRCEDV-MRPVCAT-NGE---TFDNECEMKKKSCETKSMIKVKHQGTC 445
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 DCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRK--VGDGECAGSDG 302
DCTN K E C SK S C NN+ C + + + K V DGE SDG
Sbjct: 149 DCTNGKDEQNCTSKT--------SKCPDNNFQCSNGNCIFKNWVCDGEEDCSDG 194
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 DCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRK--VGDGECAGSDG 302
DCTN K E C SK S C NN+ C + + + K V DGE SDG
Sbjct: 151 DCTNGKDEQNCTSKT--------SKCPDNNFQCSNGNCIFKNWVCDGEEDCSDG 196
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 360 CIYNERFH*GFVV*IKRGEFRRNQHTRHRRLSAVYLCVH 244
C Y +RF+ ++ + G+ RR +++ RR ++ +L VH
Sbjct: 172 CAYGDRFNPWYIELRRSGKPRRGPNSKKRRKASHFLVVH 210
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 360 CIYNERFH*GFVV*IKRGEFRRNQHTRHRRLSAVYLCVH 244
C Y +RF+ ++ + G+ RR +++ RR ++ +L VH
Sbjct: 172 CAYGDRFNPWYIELRRSGKPRRGPNSKKRRKASHFLVVH 210
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 530 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 579
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 580 LGSFKCHSIDCPTNYIH 596
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 530 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 579
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 580 LGSFKCHSIDCPTNYIH 596
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 530 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 579
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 580 LGSFKCHSIDCPTNYIH 596
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 391 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 440
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 441 LGSFKCHSIDCPTNYIH 457
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = +3
Query: 138 CLHDCTNVKFEPICASKNGEKPKSFGSVCVMNNYNCEHKDTLRKVGDGECAGSDGI---R 308
C+ C N K +C G K + G CV + + GECAGSD +
Sbjct: 491 CMGGCINTKGSYLCQCPPGYKIQPDGRTCV----------DVDECAMGECAGSDKVCVNT 540
Query: 309 LS*FKLQNLNGIFRYIY 359
L FK +++ YI+
Sbjct: 541 LGSFKCHSIDCPTNYIH 557
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,314,027
Number of Sequences: 27780
Number of extensions: 268891
Number of successful extensions: 637
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -