Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N11
         (631 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45619| Best HMM Match : M (HMM E-Value=0.01)                        37   0.012
SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)                   29   3.1  
SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_7061| Best HMM Match : Carn_acyltransf (HMM E-Value=2.6e-16)        27   9.5  
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  

>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
          Length = 1315

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +1

Query: 322  NGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVK 492
            N  A +++++ +DA     +N D   V  S  D I V D+ +++     +N+D  I ++ 
Sbjct: 1197 NSDAIRVMDSNSDAIRVMDSNSDAIRVMDSNSDAIRVMDSNSDEIRAMDSNSDE-IRVMD 1255

Query: 493  TNGSDVLYVLTENHDVYKVSDGGNKNEKLED 585
            +N SD + V+  N D  +V D  +   ++ D
Sbjct: 1256 SN-SDAIRVMDSNSDAIRVMDSYSDEIRVMD 1285



 Score = 34.7 bits (76), Expect = 0.063
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
 Frame = +1

Query: 259  FVEADVNDKGEKEYKGLYSLKNGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFD 429
            FV          E + +YS  N    + + + +DA     +N D   V  S  D I V D
Sbjct: 1128 FVTKATKVSNSNEIREMYS--NSDEMREMYSNSDAIRVMDSNSDAIRVMDSNSDAIRVMD 1185

Query: 430  AKTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDGGNKNEKLEDVKDAQEIV 609
            + +++     +N+D+ I ++ +N SD + V+  N D  +V D  +   ++ D  ++ EI 
Sbjct: 1186 SNSDEIRVMDSNSDA-IRVMDSN-SDAIRVMDSNSDAIRVMDSNSDAIRVMD-SNSDEIR 1242

Query: 610  LDYSNN 627
               SN+
Sbjct: 1243 AMDSNS 1248



 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +1

Query: 274  VNDKGEKEYKGLYSLKNGVATKILETGTDASA---TNDDTTEVYFSAKDGIYVFDAKTNK 444
            V D    E + + S  N    +++++ +DA     +N D   V  S  D I V D+ ++ 
Sbjct: 1233 VMDSNSDEIRAMDS--NSDEIRVMDSNSDAIRVMDSNSDAIRVMDSYSDEIRVMDSNSDA 1290

Query: 445  TEKYGTNTDSLIGIVKTNGSDV 510
                G+N+D+ I ++ +N  ++
Sbjct: 1291 IRVMGSNSDA-IRVMDSNSDEI 1311


>SB_57508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1215

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 457 GTNTDSLIGIVKTNGSDVLYVLT-ENHDVYKVSDGGNKNEKLEDVKDAQEIVLD 615
           G   D L+ ++K +G +++ VLT +N+D     D GN ++ L D  DA   +L+
Sbjct: 572 GKLKDVLVTLMKVSGEEIVKVLTNDNND--DDGDDGNDSDFLTDTFDALFAILN 623


>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
          Length = 1213

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 325 GVATKILETGTDASATNDDTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIG 483
           G+    +    +++A  D ++  YF AKD IY F  K    E +     ++ G
Sbjct: 84  GIVFVSINNTNESNAAVDVSSGPYFPAKDRIYSFQLKGKSKEPFSLTIQTVTG 136


>SB_56294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 520

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +1

Query: 379 DTTEVYFSAKDGIYVFDAKTNKTEKYGTNTDSLIGIVKTNGSDVLYVLTENHDVYKVSDG 558
           +T  +Y     G ++ +    +  + G  T   +G +  NG +++  +T +H V    DG
Sbjct: 318 ETYAIYDGGSSGCFITEGLRQQLGEDGVRTSIQLGTI--NGKEIVDTVTASHVVVTGLDG 375

Query: 559 GNKNE 573
            N  E
Sbjct: 376 NNAVE 380


>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1291

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 147 VLDKFVYE*FRRYYELLIIILSNW 76
           +LD F Y  +RR+ +LLI I++ W
Sbjct: 23  ILDVFYYPTWRRFKDLLIAIIAPW 46


>SB_7061| Best HMM Match : Carn_acyltransf (HMM E-Value=2.6e-16)
          Length = 324

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = -3

Query: 188 LRGTVRLTMSYLDEYWTNSFMNSSDDTM 105
           L+   R T +Y+ E+W+N+F+++ D  +
Sbjct: 59  LKERERTTENYVTEWWSNNFLSARDSVV 86


>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 380

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -1

Query: 574 FHFCYHRQTLCKHRDFLSKRIEHRNRLF*LYRSNYQCSFHIFQSYLFSHRKRIY 413
           +HF  HR+   +H  F ++R   R RLF  YR      +  F      +RK++Y
Sbjct: 329 YHF--HREASRRHSTFGARRHHERRRLF-RYRQRCVKIWRTFGQPKKPYRKKVY 379


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.134    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,261,580
Number of Sequences: 59808
Number of extensions: 322056
Number of successful extensions: 577
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)