Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N08
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.29 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.29 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.29 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.29 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    26   0.29 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    26   0.29 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.29 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.29 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    24   0.87 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   1.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 61  TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 120

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 121 NLSSPASS 128


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -1

Query: 316 SSDTGVRRMSPVNSQRVFLASIPDV--PSNTWTTAFEPLTSRT*PERSVPSASLSCTISE 143
           +S TGV     +++      S P +  PSN+  T    LTS      S P    + T S+
Sbjct: 105 TSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164

Query: 142 NLGNLTSS 119
           NL +  SS
Sbjct: 165 NLSSPASS 172


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 403 PWMSKKSSARIGGPLSIGLPEPLNT 329
           PWM +K + R       GLP  L T
Sbjct: 116 PWMKEKKTTRKSSQQENGLPRRLRT 140


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 249 GIDAKNTLCEFTGDILR 299
           G+   N +CEFTGD  R
Sbjct: 292 GVMGFNEICEFTGDWTR 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,205
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)