Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N08
(610 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.) 201 4e-52
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0) 58 7e-09
SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_32447| Best HMM Match : PHD (HMM E-Value=0.017) 31 0.73
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 31 0.97
SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 29 2.9
SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 29 3.9
SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26) 28 5.1
SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0) 28 6.8
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_10222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_3222| Best HMM Match : DUF733 (HMM E-Value=4.2) 27 9.0
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 201 bits (490), Expect = 4e-52
Identities = 96/110 (87%), Positives = 102/110 (92%)
Frame = +3
Query: 78 YKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGID 257
YKTVSGVNGPLVILD VKFPKF+EIV L L DG+ RSG+VLEVSGSKAVVQVFEGTSGID
Sbjct: 14 YKTVSGVNGPLVILDNVKFPKFAEIVTLTLQDGSQRSGEVLEVSGSKAVVQVFEGTSGID 73
Query: 258 AKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQ 407
AK+T CEFTGDILRTPVSEDMLGRVFNGSGK ID+GPP+LAEDFLDIQ Q
Sbjct: 74 AKHTTCEFTGDILRTPVSEDMLGRVFNGSGKAIDRGPPVLAEDFLDIQAQ 123
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 540 EIAAQICRQAGLVKVPG*SVLDD 608
+I AQICRQAGLVK V+DD
Sbjct: 119 DIQAQICRQAGLVKF-NKGVMDD 140
>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
Length = 448
Score = 57.6 bits (133), Expect = 7e-09
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 3 LSAAQASKEHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTL 182
+SAA A++ + S ++P K ++ + + + + P ++++ L
Sbjct: 49 VSAAAAAQASQKSASSPPAARPGAVGKVLAVIGAVVDVQFDEDLPPILNALEVENRTPRL 108
Query: 183 RSGQVLEVSGSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID 359
+V + G V + +GT G+ + C TG + PV + LGR+ N G+PID
Sbjct: 109 IL-EVAQHLGENTVRTIAMDGTEGL-IRGQKCVDTGGPITIPVGPETLGRIINVIGEPID 166
Query: 360 KGPPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGL 530
+ P+ + I + +E+++TGI +D++ A+G KI +F AG+
Sbjct: 167 ERGPVETDKRAAIHAEAPEFVEMSTEQEILETGIKVVDLLAPYAKGGKIGLFGGAGV 223
>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 225 VQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPPILAEDFLDIQ 401
V VF G + + + + TG I+ PV E++LGRV + G PID KGP + ++
Sbjct: 12 VVVF-GNDRLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPTGGTRARVGVK 70
Query: 402 GQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 503
I P R +E + TGI A+D + I RGQ+
Sbjct: 71 APGIIP--RTSVKEPMLTGIKAVDSLVPIGRGQR 102
>SB_16785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
G D + TGG ++ +T GD H HV GGD S H+ G D
Sbjct: 22 GDDSRIHVTGGDDSRIHVTGGDDSHIHVTGGDDSRIHVTGDD 63
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 527 TGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
TGG ++ +T GD H HV GGD S H+ G D
Sbjct: 70 TGGDDSRIHVTGGDDSHIHVTGGDVSRIHVTGGD 103
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTT--GDGVHHVNGGDTSLDHLLGVD 429
G D + TGG ++ + T GD HV GGD S H+ G D
Sbjct: 102 GDDSRIHVTGGGDDSRIHVTEGGDSRIHVTGGDDSRIHVTGGD 144
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
G D + TGG ++ +T GD HV GGD S H+ G D
Sbjct: 133 GDDSRIHVTGGDDSRIHVTGGDDSRIHVTGGDNSRIHVTGGD 174
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
G D + TGG ++ +T GD HV GGD S H+ G D
Sbjct: 143 GDDSRIHVTGGDDSRIHVTGGDNSRIHVTGGDDSRIHVTGGD 184
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 578 DKTGLSTDLGGDFVVGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
D + + G D + TGG ++ +T GD HV GGD S H+ G D
Sbjct: 164 DNSRIHVTGGDDSRIHVTGGDDSRIHVTGGDDSRIHVTGGDDSRIHVTGGD 214
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTTG--DGVHHVNGGDTSLDHLLGVD 429
G D + TGG +N + TG D HV GGD S H+ G D
Sbjct: 153 GDDSRIHVTGG-DNSRIHVTGGDDSRIHVTGGDDSRIHVTGGD 194
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 551 GGDFVVGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLG 435
G D + TGG ++ +T GD HV GGD S H+ G
Sbjct: 183 GDDSRIHVTGGDDSRIHVTGGDDSRIHVTGGDDSRIHVTG 222
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 551 GGDFV-VGETGGRENGNLLTTGDGVH-HVNGGDTSLDHLLGVD 429
GGD + TGG ++ +T GD HV GGD S H+ G D
Sbjct: 162 GGDNSRIHVTGGDDSRIHVTGGDDSRIHVTGGDDSRIHVTGGD 204
>SB_32447| Best HMM Match : PHD (HMM E-Value=0.017)
Length = 443
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = -1
Query: 295 RMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSCTISENLGNLTSSK 116
++ P++ + + + DVP T+ P+++RT S+P C +SE + S
Sbjct: 40 KVQPLSHLKERIPKLLDVPPRDSTSGSPPMSTRTRSRSSIPVIPEICFMSEGASPESMSS 99
Query: 115 MTNGPFTPDT 86
+ FT D+
Sbjct: 100 WLDTRFTGDS 109
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 30.7 bits (66), Expect = 0.97
Identities = 25/94 (26%), Positives = 43/94 (45%)
Frame = -1
Query: 361 LSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PER 182
+S P PL + ++S + + SP+ S +S P + S++ T+ PLTS +
Sbjct: 165 ISAYFPSPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSP-LTSSSPLTSSSPLTSSSPLTS 223
Query: 181 SVPSASLSCTISENLGNLTSSKMTNGPFTPDTVL 80
S P S S S + +S ++ P T + L
Sbjct: 224 SSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPL 257
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -1
Query: 385 SSARIGGPLSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPL 206
SS+ + P + P PL + ++S + + SP+ S +S P + S + T+ PL
Sbjct: 181 SSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSP-LTSPSPLTSSSPL 239
Query: 205 TSRT*PERSVPSASLS 158
TS + S P S S
Sbjct: 240 TSSSPLTSSSPLTSSS 255
Score = 28.3 bits (60), Expect = 5.1
Identities = 27/105 (25%), Positives = 45/105 (42%)
Frame = -1
Query: 385 SSARIGGPLSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPL 206
SS+ + + P PL + ++S + + SP+ S +S P + S++ T+ PL
Sbjct: 175 SSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSP-LTSSSPLTSPSPL 233
Query: 205 TSRT*PERSVPSASLSCTISENLGNLTSSKMTNGPFTPDTVL*VR 71
TS + S P S S S + S + P T L +R
Sbjct: 234 TSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSPSPLTXXXXLHLR 278
>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1565
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 276 EFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINP 419
E T D +R PV+ +L RV+NGS + D LAE+ ++G + P
Sbjct: 1111 EETRDEIRDPVTRQILDRVYNGSVEFADLWVSGLAEN--PVKGASVGP 1156
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -1
Query: 397 MSKKSSARIGGPLSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTA 218
+S SA G +++G+ T P S+ +GVRR S NS R+ S ++
Sbjct: 798 ISLMKSAAQNGQVTLGVRRR-QTMPGRSTPSGVRRTSQSNSVRLTSRSAGNLTELARRDE 856
Query: 217 FEPLTSRT*PERS 179
+EP R+ ER+
Sbjct: 857 YEPNGFRSPSERA 869
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 14 PSKQGACLGCVQGFHI--PAPPHLQDSVRC-KWT 106
P +GC++GF P PP L+ +VRC WT
Sbjct: 1476 PELLNGFIGCIRGFVSTDPPPPPLRSTVRCLTWT 1509
>SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 238
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 453 TGISAIDVMNSIARGQKIPIFSAAGL 530
TGI ID++ A+G KI +F AG+
Sbjct: 5 TGIKVIDLIEPYAKGGKIGLFGGAGV 30
>SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26)
Length = 541
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 48 RDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEV 206
RDF SQPRL VN P +D++K + + G L+ GQ +EV
Sbjct: 184 RDFTSQPRLIVIRSFDVNKPGCEVDDLK----GGVAGGSILKGVLKIGQEIEV 232
>SB_47216| Best HMM Match : Oxidored_molyb (HMM E-Value=0)
Length = 672
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 338 RLW*TYRQGAPNPS*GLLGHPGTTNQPVVAYLPRGDDPNW--YLRH*RDEL 484
R+W TY+ G + + + GHPG T++ ++A +P W Y H ++E+
Sbjct: 218 RIWVTYKGGVYDITDFIDGHPGGTSKIILA-AGAALEPYWAMYAVHKKEEV 267
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.5 bits (58), Expect = 9.0
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = -1
Query: 400 WMSKKSSARIGGPLSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTT 221
WM+ + G + G P + S TG ++SP +Q+V I DVP
Sbjct: 4306 WMAVNALRDTDGSNNNGTPLSIG---KTSHRTGASKISPQMTQQVEADEIYDVPPLALRA 4362
Query: 220 AF-EPLTSRT*PERSVPSASLSCTISENLGNLTSSKMTNGPFTPDTV 83
+ EP R + A S T S+ L +TSS ++ TP+ V
Sbjct: 4363 SVNEPTVYRETDLDQITGAK-SMTSSDTLATVTSSG-SSVKVTPNVV 4407
>SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 234 FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPI 413
F+ T + +K LC+FT +L +S+ + G K I KG +L L++Q P
Sbjct: 367 FKNTKDVKSKENLCKFTLPLL-IGLSQAL------GVSK-ICKGNEVLISQVLNLQFSPS 418
Query: 414 NPWSR-IYPEEMIQ 452
P SR + P +++
Sbjct: 419 KPGSRPMLPRPLVR 432
>SB_10222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 283 VNSQRVFLASIPDVP---SNTWTTAFEPLTSRT*PERSVPSASLSCTISENLG 134
VN + F A + DV + T+ T+ E +T S PS + SCT S N G
Sbjct: 51 VNESKSFCADLRDVQRYNNGTFITSGEAMTVNW----SSPSGNYSCTASNNFG 99
>SB_3222| Best HMM Match : DUF733 (HMM E-Value=4.2)
Length = 399
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 2 PLRCPSKQGACLGCVQGFHIPAPPHLQDS 88
P RC G QG H P P H +D+
Sbjct: 317 PFRCNEGYGRSSRVTQGIHAPFPCHAEDA 345
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 373 IGGPLSIGLPEPLNTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTT 221
I G +S + + T S T +R +++Q F +PD PS+ +T+
Sbjct: 563 ISGDISFAMCDKSITNNTKSFHTKIRTPVQLSNQGSFTRKLPDAPSDHFTS 613
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,219,610
Number of Sequences: 59808
Number of extensions: 467360
Number of successful extensions: 1608
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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