Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_N08
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 327 3e-90
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 299 1e-81
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 64 1e-10
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 45 5e-05
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 32 0.28
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 28 6.0
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 28 6.0
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 6.0
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 27 7.9
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 27 7.9
Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical p... 27 7.9
AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical ... 27 7.9
AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein. 27 7.9
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 327 bits (804), Expect = 3e-90
Identities = 153/186 (82%), Positives = 172/186 (92%)
Frame = +3
Query: 30 HVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVS 209
H A+ R++ + PRL Y+TV GVNGPLVIL++VKFP+FSEIV++ L DG+ RSGQVLE+S
Sbjct: 13 HKSAIIRNYNTNPRLIYQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEIS 72
Query: 210 GSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF 389
+KAVVQVFEGTSGIDAKNT+CEFTGDILRTPVSEDMLGR+FNGSGKPIDKGPP+LAEDF
Sbjct: 73 KNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDF 132
Query: 390 LDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQA 569
LDI GQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSA+GLPHNEIAAQI RQ
Sbjct: 133 LDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQG 192
Query: 570 GLVKVP 587
GLV++P
Sbjct: 193 GLVQLP 198
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 299 bits (733), Expect = 1e-81
Identities = 140/187 (74%), Positives = 165/187 (88%)
Frame = +3
Query: 30 HVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVS 209
H A+ +++ ++P+LTY+TV GVNGPLVI+ VKFP F+EIV++ L +G +R GQVLE S
Sbjct: 25 HRTALIQNYSTKPKLTYQTVFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESS 84
Query: 210 GSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF 389
+KAVVQVFEGT+G+DAK T CEFTGDI R+PVS DMLGR+FNGSGKPIDKGPP+L ED+
Sbjct: 85 KNKAVVQVFEGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDY 144
Query: 390 LDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQA 569
LDI GQPINP++RIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQI RQ
Sbjct: 145 LDINGQPINPFNRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQG 204
Query: 570 GLVKVPG 590
GLV++PG
Sbjct: 205 GLVQLPG 211
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +3
Query: 195 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 362
+LEVS G V + +GT G+ + + TGD ++ PV + LGR+ N G+PID+
Sbjct: 105 ILEVSQHLGDNVVRCIAMDGTEGLVRGQPVAD-TGDPIKIPVGPETLGRIMNVIGEPIDE 163
Query: 363 GPPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGL 530
PI +++F I + +E++ TGI +D++ A+G KI +F AG+
Sbjct: 164 RGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 219
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 189 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 365
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 62 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 120
Query: 366 PPILA-EDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 503
P A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 121 PIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 165
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 189 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 365
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 89 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 147
Query: 366 PPILA-EDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 503
P A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 148 PIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 192
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/94 (26%), Positives = 51/94 (54%)
Frame = +3
Query: 75 TYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGI 254
+Y V GV+GP+V +++ E+V++ + G+++ + G A +QV+E TSG+
Sbjct: 6 SYGFVYGVSGPVVTAEKMAGSAMYELVRVGHQELV---GEIIRLEGDYATIQVYEETSGV 62
Query: 255 DAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPI 356
+ + TG L + ++G +F+G +P+
Sbjct: 63 TIGDPVLR-TGKPLSVELGPGIMGSIFDGIQRPL 95
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 286 PVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSCTISENLGNLTSSKMTN 107
P S SI D SN+ P ++ P S+P+ S S +E + T S ++N
Sbjct: 66 PTTSSNSVKESINDDESNSENNKLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSN 125
Query: 106 GPFTPD 89
P TPD
Sbjct: 126 DP-TPD 130
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.1
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 186 SGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-K 362
+G+VL + + +V+ G I A+ + EF I ++ D+ G PID K
Sbjct: 56 TGKVLSIGDG--IARVY-GLKNIQAEE-MVEFDSGIKGMAMNLDVDNVGVVVLGNPIDGK 111
Query: 363 GPPILAE-DFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 503
GP A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 112 GPIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 157
>Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical
protein F11F1.4 protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -3
Query: 602 EHGLTGYLDKTGLSTDLGGDFVVGETGGRENGNLLTTGDGVHHVNGGDTSLDHLLGV 432
E GL G L GL LGG+ + G GG + G G + + G + D LLG+
Sbjct: 36 EGGLGGILGNGGLGGILGGNGLGGVLGGEDGG----LGGIIGQLLGSANATDGLLGI 88
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -3
Query: 602 EHGLTGYLDKTGLSTDLGGDFVVGETGGRENGNLLTTGDGVHHVNGGDTSLDHLLGV 432
E GL G L GL LGG+ + G GG + G G + + G + D LLG+
Sbjct: 42 EGGLGGILGNGGLGGILGGNGLGGVLGGEDGG----LGGIIGQLLGSANATDGLLGI 94
>Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical
protein F11F1.5 protein.
Length = 246
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = -3
Query: 602 EHGLTGYLDKTGLSTDLGGDFVVGETGGRENGNLLTTGDGVHHVNGGDTSLDHLLGV 432
E GL G L GL LGG+ + G GG + G G + + G + D LLG+
Sbjct: 42 EGGLGGILGNGGLGGILGGNGLGGILGGEDGG----LGGIIGQLLGSANATDGLLGI 94
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 479 ELHRPWSEDSHFLGRRSPPQRNRRPDL*TGR 571
+++RPW +DS+ G P RN RP+ GR
Sbjct: 210 QMNRPWGQDSN-RGMSGMPPRNGRPNHNQGR 239
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = -1
Query: 334 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSC 155
+T+P MS+ G S V S L S VPS+T T TS ++ +S +
Sbjct: 1890 STQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG---STSSGTVGSTISESSTAA 1946
Query: 154 TISENLGNLTSSKMTNG 104
+ S G+ + T+G
Sbjct: 1947 STSSQTGSTVTIGSTSG 1963
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = -1
Query: 334 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSC 155
+T+P MS+ G S V S L S VPS+T T S S ++
Sbjct: 1568 STQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG------------STSSGTVGS 1615
Query: 154 TISENLGNLTSSKMTNGPFT 95
TISE+ ++S T T
Sbjct: 1616 TISESSTTASASSQTGSTVT 1635
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 533 GETGGRENGNLLTTGDGVHHVNGGDTS 453
GET G +G+ T+G+G GDTS
Sbjct: 74 GETSGESSGDEETSGEGSGEEGSGDTS 100
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 533 GETGGRENGNLLTTGDGVHHVNGGDTS 453
GET G +G+ T+G+G GDTS
Sbjct: 74 GETSGESSGDEETSGEGSGEEGSGDTS 100
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 120 DEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGIDAKNTL 272
D+ F +FSE + S V++ S SK FEG+SG DA +T+
Sbjct: 231 DDGIFNRFSEKLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTI 281
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 512 NGNLLTTGDGVHHVNGGDTSLDHLLGVDTR--PRVDWLSLDVQEVLS*DW 369
+GNL+T V V GG + + + GV P WL LD EVL DW
Sbjct: 350 SGNLVT----VSSVVGGIAAQEAMKGVTHHMTPLKQWLHLDHVEVLPGDW 395
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 512 NGNLLTTGDGVHHVNGGDTSLDHLLGVDTR--PRVDWLSLDVQEVLS*DW 369
+GNL+T V V GG + + + GV P WL LD EVL DW
Sbjct: 435 SGNLVT----VSSVVGGIAAQEAMKGVTHHMTPLKQWLHLDHVEVLPGDW 480
>Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 62 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 145
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
>AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 62 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 145
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
>AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein.
Length = 217
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 62 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 145
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,115,887
Number of Sequences: 27780
Number of extensions: 340843
Number of successful extensions: 969
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -