Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N06
         (610 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21865| Best HMM Match : DUF1010 (HMM E-Value=1.5)                   28   6.8  
SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.8  
SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.0  

>SB_21865| Best HMM Match : DUF1010 (HMM E-Value=1.5)
          Length = 359

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +1

Query: 55  STQIVELFPYR-GLFNYFGYLKYQFLNSV---HFNLSTTA*IPFTNAKVILEGFECIFWG 222
           S  I  +  YR  L+  + Y++Y+++ S+      LS+ +  PF     ++E   C+F  
Sbjct: 127 SVAISRVSLYRVSLYRKYRYVEYRYIESIVTSFLALSSCSSTPFVFDGAVIELCPCVFLW 186

Query: 223 FCTDI 237
            C ++
Sbjct: 187 LCEEV 191


>SB_23696| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 559

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 55  STQIVELFPYRGLFNYFGY 111
           S  +V+ FP RG+ NYF Y
Sbjct: 525 SVDVVDTFPIRGVINYFVY 543


>SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 739

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 287 MKKYSVISSK*QIKTPRISVQNPQNI-HSNPSKMTLALVKGI*AVVDRLKWTEFKN*YFR 111
           +KKY V S++   K  ++ + NP NI  SN +   L  + GI A V + +W  + N  F 
Sbjct: 326 LKKYVVDSAQPASKFLQVKLLNPTNIVSSNCNPRDLDCIPGIEA-VSQEEWNLYVN--FL 382

Query: 110 *PK*LNKPRYGNNSTICVDQS 48
            P+ + + R G    + +  S
Sbjct: 383 GPEAVKESRNGGYGRLMLPSS 403


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,312,879
Number of Sequences: 59808
Number of extensions: 289985
Number of successful extensions: 456
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)