Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N03
         (543 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)                 28   4.3  
SB_22369| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  

>SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
          Length = 1532

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 499  EGSGWVHVSVPTHAYNRKALRIAGIGNYKWHQPT 398
            +G  W   S P+ A+ R+   + G+G Y W + T
Sbjct: 1361 QGRRWRPHSRPSSAFRRQRFALPGLGCYPWSKQT 1394


>SB_22369| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 236

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 404 LVPLVISYTRDSKSFPVVRVSGHANVHPTGSFIYFCV 514
           L  +  S  RDS S   V + GHA  H T + ++ CV
Sbjct: 22  LASMTFSKCRDSMSIYDVALIGHAYKHVTATSLHDCV 58


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,929,305
Number of Sequences: 59808
Number of extensions: 296471
Number of successful extensions: 510
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)