Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N01
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   1.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.5  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 5   NLTIT*KMGKTSKDKRDIYY 64
           N+TI   + K  KD+ DI+Y
Sbjct: 142 NMTINDDLEKREKDRMDIFY 161


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 52  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 91


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCSPV---TSGAPSHTTRSAFRPSNS 346
           +A+ +  D T S+   SP    T+GAP  +T     PSNS
Sbjct: 96  SASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNS 135


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 459 CNAANRSCDCTYSSM 415
           CN  NR  DC  + M
Sbjct: 553 CNGDNRPADCQQNCM 567


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 275 PLLANPQPRS*HLQHFR 225
           PLLAN    S HL H +
Sbjct: 99  PLLANGYNHSPHLSHMQ 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,119
Number of Sequences: 336
Number of extensions: 2552
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)