Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_N01
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36238-6|CAA85279.2|  337|Caenorhabditis elegans Hypothetical pr...   244   3e-65
AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical ...   130   5e-31
AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical ...   130   5e-31
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...   130   5e-31
Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    33   0.18 
AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical ...    32   0.24 
AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical ...    30   0.98 
U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   4.0  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    28   5.2  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   5.2  

>Z36238-6|CAA85279.2|  337|Caenorhabditis elegans Hypothetical
           protein R74.7 protein.
          Length = 337

 Score =  244 bits (598), Expect = 3e-65
 Identities = 114/177 (64%), Positives = 146/177 (82%)
 Frame = +2

Query: 26  MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFDNVLRAVDLCAAPGSWSQVLT 205
           MGKTS+DKRDIYYRLAKE  WRARSAFKL+QI++E+ I   V RAVDLCAAPGSWSQVL+
Sbjct: 1   MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLS 60

Query: 206 KTLRQNAENVEDVKIVAVDLQAMAALPGVKQIQGDITKLSTACSIIKEFEGLKADLVVCD 385
           K L    E  ++ KIVA+DLQ MA +PGV Q+QGDIT + TA  +IK F G K+D+V+CD
Sbjct: 61  KRLY---EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICD 117

Query: 386 GAPDVTGLHDIDEYVQSQLLLAALHITTHVLKIGGVFVAKIFRGKDVSLLYSQLKQF 556
           GAPDVTG+H +DE++Q++L+LAA +IT+HVLK GG F+AKIFR ++ SLLY+Q+K++
Sbjct: 118 GAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKY 174


>AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical
           protein H06I04.3b protein.
          Length = 716

 Score =  130 bits (315), Expect = 5e-31
 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
 Frame = +2

Query: 23  KMGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFDNVLRAVDLCAAPGSWSQVL 202
           K  K  K +RD YY+LAKE G+R+R+AFKL+Q+N+ +   +     VDLCAAPG W QV 
Sbjct: 3   KKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVA 62

Query: 203 TKTLRQNAENVEDVKIVAVDLQAMAALPGVKQIQGDITKLSTACSIIKEFEGLKADLVVC 382
           ++ +  ++       IV VDL  +  +     +QGDIT   T  +I KE +   AD V+ 
Sbjct: 63  SQFMPVSS------LIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLH 116

Query: 383 DGAPDVTGLHDI-DEYVQSQLLLAALHITTHVLKIGGVFVAKIFRGKDVSLL 535
           DGAP+V GL+ + D + Q+ L L+AL + T +L+ GG FV K+FR  D S L
Sbjct: 117 DGAPNV-GLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL 167


>AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical
           protein H06I04.3c protein.
          Length = 786

 Score =  130 bits (315), Expect = 5e-31
 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
 Frame = +2

Query: 23  KMGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFDNVLRAVDLCAAPGSWSQVL 202
           K  K  K +RD YY+LAKE G+R+R+AFKL+Q+N+ +   +     VDLCAAPG W QV 
Sbjct: 3   KKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVA 62

Query: 203 TKTLRQNAENVEDVKIVAVDLQAMAALPGVKQIQGDITKLSTACSIIKEFEGLKADLVVC 382
           ++ +  ++       IV VDL  +  +     +QGDIT   T  +I KE +   AD V+ 
Sbjct: 63  SQFMPVSS------LIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLH 116

Query: 383 DGAPDVTGLHDI-DEYVQSQLLLAALHITTHVLKIGGVFVAKIFRGKDVSLL 535
           DGAP+V GL+ + D + Q+ L L+AL + T +L+ GG FV K+FR  D S L
Sbjct: 117 DGAPNV-GLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL 167


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score =  130 bits (315), Expect = 5e-31
 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
 Frame = +2

Query: 23  KMGKTSKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFDNVLRAVDLCAAPGSWSQVL 202
           K  K  K +RD YY+LAKE G+R+R+AFKL+Q+N+ +   +     VDLCAAPG W QV 
Sbjct: 3   KKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVA 62

Query: 203 TKTLRQNAENVEDVKIVAVDLQAMAALPGVKQIQGDITKLSTACSIIKEFEGLKADLVVC 382
           ++ +  ++       IV VDL  +  +     +QGDIT   T  +I KE +   AD V+ 
Sbjct: 63  SQFMPVSS------LIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLH 116

Query: 383 DGAPDVTGLHDI-DEYVQSQLLLAALHITTHVLKIGGVFVAKIFRGKDVSLL 535
           DGAP+V GL+ + D + Q+ L L+AL + T +L+ GG FV K+FR  D S L
Sbjct: 117 DGAPNV-GLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCL 167


>Z93382-7|CAB07618.1|  214|Caenorhabditis elegans Hypothetical
           protein F45G2.9 protein.
          Length = 214

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
 Frame = +2

Query: 71  AKEEGWRARSAFKLLQINEEYNIFDNVLRAVDLCAAPGSWSQVLTKTLRQNAENVEDVKI 250
           A+E  +RARSAFKL++INE++         +D+  APGSW QV+ +       +      
Sbjct: 27  AREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKCPNGYAS------ 80

Query: 251 VAVDLQAMAALPGVKQIQ-GDITKLSTACSIIKEFEGLKADLVVCDGAPDVTGLHDID-- 421
             VDLQ +  + G   +   DIT  +    I ++    + D+V+ D AP+ TG +  D  
Sbjct: 81  -GVDLQNVLPIRGADILSLSDITDPAVKLKIREKLAHRQVDVVLSDMAPNPTGDNATDHL 139

Query: 422 ---EYVQSQLLLAALHITTHVLKIGGVFVAKIFRG 517
              E  +S   L ++     ++K  GV++ KI+ G
Sbjct: 140 RLIELCRSVFRLFSVENEIELVK-NGVYLCKIWDG 173


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCS---PVTSGAPSHTTRSAFRPSNSFIIEHAVDSFVISPCICLTP 286
           +A + +CD T  S S S   P T+   S  T +   P+++  +  A+ +   +P    T 
Sbjct: 261 DAGDNTCDYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTI 320

Query: 285 GNAAIACKSTATILTSST 232
            + +    STA+  TSST
Sbjct: 321 ESTSTTFTSTASTSTSST 338


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -1

Query: 456 NAANRSCDCTYSSMSCS---PVTSGAPSHTTRSAFRPSNSFIIEHAVDSFVISPCICLTP 286
           +A + +CD T  S S S   P T+   S  T +   P+++  +  A+ +   +P    T 
Sbjct: 261 DAGDNTCDYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTI 320

Query: 285 GNAAIACKSTATILTSST 232
            + +    STA+  TSST
Sbjct: 321 ESTSTTFTSTASTSTSST 338


>AF078792-3|AAC26945.2|  635|Caenorhabditis elegans Hypothetical
           protein Y40D12A.1a protein.
          Length = 635

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +2

Query: 305 GDITKLSTACSIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALHITTHVLKI 484
           GDI K +    I ++  G   DLV  DG+ +  G     E + S L+ A + +   +L+ 
Sbjct: 196 GDIEKFTEEYLIKQKLAGT-FDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALKLLRR 254

Query: 485 GGVFVAKIFR 514
            G  + K +R
Sbjct: 255 NGRLILKTYR 264


>AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.5 protein.
          Length = 639

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +2

Query: 161 VDLCAAPGSWSQVLTKTLRQNAENVEDVKIVAVDL 265
           +DLCAAPGS +  L + + +N EN + + ++A D+
Sbjct: 174 LDLCAAPGSKTTQLLEMIHENEENPKGM-VIANDV 207


>U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical
           protein K07C11.9 protein.
          Length = 642

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +2

Query: 125 EEYNIFDNVLRAVDLCAAPGSWSQVLTKTLRQNAENVEDVKIVAVDLQAMAALPGVKQIQ 304
           E Y++    LR +D C   G  S+   K L +  E  E+ + +  +   +AA   ++++Q
Sbjct: 139 ENYSLSSEELRELDECEQSGHLSEFFFKVLERCHEIRENCRNMVQEQGHLAAFEVMEKMQ 198

Query: 305 G-DITKLSTACSIIK-EFEGLKAD 370
             D    +  C+ +K EF+ L  D
Sbjct: 199 KIDERSHAIICNNLKREFQNLTVD 222


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = -1

Query: 441  SCDCTYSSMSCSPVTSGAPSHTTRSAFRPSNSFIIEHA-VDSFVISPCICLTPGNAAIAC 265
            S     SS + S  T+ +PS TT S   P +S +     V  +  + CIC T  N     
Sbjct: 828  STSAPQSSTAVSSTTT-SPSTTTGSTPAPQSSTVASTTTVSPYTTTECICTTVSNT--FG 884

Query: 264  KSTATILTSST 232
             ST   LTSS+
Sbjct: 885  TSTTQGLTSSS 895


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 423  SSMSCSPVTSGAPSHTTRSAFRPSNS 346
            +S S +P+T+ APS TT+S+  PS S
Sbjct: 2670 TSTSPAPITTPAPSSTTQSSSGPSAS 2695


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 423  SSMSCSPVTSGAPSHTTRSAFRPSNS 346
            +S S +P+T+ APS TT+S+  PS S
Sbjct: 2670 TSTSPAPITTPAPSSTTQSSSGPSAS 2695


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 423  SSMSCSPVTSGAPSHTTRSAFRPSNS 346
            +S S +P+T+ APS TT+S+  PS S
Sbjct: 2670 TSTSPAPITTPAPSSTTQSSSGPSAS 2695


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 423  SSMSCSPVTSGAPSHTTRSAFRPSNS 346
            +S S +P+T+ APS TT+S+  PS S
Sbjct: 2670 TSTSPAPITTPAPSSTTQSSSGPSAS 2695


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,769,579
Number of Sequences: 27780
Number of extensions: 234990
Number of successful extensions: 717
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)