Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M23
(593 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0Q042 Cluster: Attacin-like protein; n=5; Obtectomera|... 283 2e-75
UniRef50_P50725 Cluster: Attacin-A precursor; n=14; Obtectomera|... 213 2e-54
UniRef50_O96361 Cluster: Putative attacin; n=1; Hyphantria cunea... 176 3e-43
UniRef50_Q95NH6 Cluster: Attacin-C precursor [Contains: Immune-i... 67 3e-10
UniRef50_Q4PNY5 Cluster: Attacin; n=4; Calyptratae|Rep: Attacin ... 64 3e-09
UniRef50_Q5MGP9 Cluster: Defense protein 2; n=1; Lonomia obliqua... 51 2e-05
UniRef50_Q17FI3 Cluster: Antibacterial peptide, putative; n=1; A... 47 3e-04
UniRef50_Q29QG5 Cluster: IP02686p; n=5; Sophophora|Rep: IP02686p... 43 0.006
UniRef50_A7MMS4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.10
UniRef50_UPI0000DA3F46 Cluster: PREDICTED: hypothetical protein;... 36 0.54
UniRef50_Q8VP03 Cluster: Putative integral membrane protein; n=2... 36 0.72
UniRef50_Q6Z1D9 Cluster: Plus agglutinin-like protein; n=1; Oryz... 36 0.72
UniRef50_O77242 Cluster: Mucin-like protein; n=1; Heterodera gly... 36 0.72
UniRef50_Q2GW84 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q02505 Cluster: Mucin-3A precursor; n=25; Eutheria|Rep:... 36 0.95
UniRef50_A2QVK4 Cluster: Contig An11c0050, complete genome; n=3;... 35 1.3
UniRef50_A6U9F0 Cluster: Porin precursor; n=3; Rhizobiaceae|Rep:... 34 2.2
UniRef50_Q4QCS6 Cluster: Calpain-like cysteine peptidase, putati... 34 2.2
UniRef50_A5TUP6 Cluster: Possible outer membrane protein P1; n=3... 34 2.9
UniRef50_Q8X1Y2 Cluster: Mating type 1-2 protein; n=1; Mycosphae... 34 2.9
UniRef50_P24490 Cluster: Sarcotoxin II-3 precursor; n=5; Sarcoph... 34 2.9
UniRef50_UPI0000DD834D Cluster: PREDICTED: hypothetical protein;... 33 3.8
UniRef50_Q47I42 Cluster: Anti-sigma factor antagonist; n=1; Dech... 33 3.8
UniRef50_UPI0000F1FA14 Cluster: PREDICTED: similar to predicted ... 33 5.0
UniRef50_Q3JV89 Cluster: Putative uncharacterized protein; n=6; ... 33 5.0
UniRef50_Q2S381 Cluster: Periplasmic binding protein, putative; ... 33 5.0
UniRef50_A2TPI2 Cluster: OmpA/MotB; n=3; Flavobacteria|Rep: OmpA... 33 5.0
UniRef50_A0JYF8 Cluster: NAD-glutamate dehydrogenase; n=6; Actin... 33 5.0
UniRef50_A3VTS2 Cluster: Sensory box histidine kinase; n=1; Parv... 33 6.7
UniRef50_Q9VS76 Cluster: CG8541-PA; n=3; Sophophora|Rep: CG8541-... 33 6.7
UniRef50_Q9P7J9 Cluster: Sequence orphan; n=1; Schizosaccharomyc... 33 6.7
UniRef50_Q6C5C7 Cluster: Similar to tr|Q8RY11 Arabidopsis thalia... 33 6.7
UniRef50_Q8CG65 Cluster: SCO-spondin precursor; n=10; Eutheria|R... 33 6.7
UniRef50_Q8VHG2 Cluster: Angiomotin; n=21; Tetrapoda|Rep: Angiom... 33 6.7
UniRef50_UPI0001554F5A Cluster: PREDICTED: hypothetical protein,... 32 8.8
UniRef50_UPI0000F2CA86 Cluster: PREDICTED: similar to mucin 16; ... 32 8.8
UniRef50_UPI00006C04F2 Cluster: PREDICTED: hypothetical protein;... 32 8.8
UniRef50_Q4SI38 Cluster: Chromosome 5 SCAF14581, whole genome sh... 32 8.8
UniRef50_A2A700 Cluster: Novel protein; n=1; Mus musculus|Rep: N... 32 8.8
UniRef50_Q89RD6 Cluster: ABC transporter permease protein; n=2; ... 32 8.8
UniRef50_Q113D0 Cluster: Mg-chelatase subunit ChlI-like; n=1; Tr... 32 8.8
UniRef50_Q54JN8 Cluster: Putative uncharacterized protein; n=2; ... 32 8.8
UniRef50_Q2UM98 Cluster: Predicted protein; n=6; Trichocomaceae|... 32 8.8
UniRef50_A6QSU7 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 8.8
>UniRef50_Q0Q042 Cluster: Attacin-like protein; n=5;
Obtectomera|Rep: Attacin-like protein - Antheraea
mylitta (Tasar silkworm)
Length = 230
Score = 283 bits (694), Expect = 2e-75
Identities = 138/192 (71%), Positives = 159/192 (82%), Gaps = 1/192 (0%)
Frame = +3
Query: 21 MFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEE-PELLTSSRVRRDAHGALTLNSDG 197
MF K+ FL+ V L VGV SRYL + +P YYI+ YEE PE ++SRVRR A GALT+NSDG
Sbjct: 1 MFAKL-FLVSVLL-VGVNSRYLRIEQPGYYIEQYEEQPEQWSNSRVRRQA-GALTVNSDG 57
Query: 198 TSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDIHIPGFG 377
TSGA VK+P GN+ + +SAIGSLD +R KLGAATAG+A DNVNGHG +LT HIPGFG
Sbjct: 58 TSGAAVKIPITGNENHKLSAIGSLDFNDRNKLGAATAGLAYDNVNGHGATLTKTHIPGFG 117
Query: 378 DKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAX 557
DK+TAAGKVNLFHND HD+ A AFATRNMP+I VPNFNTVGGG+DYMFKD+IGASA+A
Sbjct: 118 DKMTAAGKVNLFHNDNHDLNANAFATRNMPNIPQVPNFNTVGGGVDYMFKDRIGASASAA 177
Query: 558 HTDFINRNDYSL 593
HTDFINRNDYSL
Sbjct: 178 HTDFINRNDYSL 189
>UniRef50_P50725 Cluster: Attacin-A precursor; n=14;
Obtectomera|Rep: Attacin-A precursor - Trichoplusia ni
(Cabbage looper)
Length = 254
Score = 213 bits (521), Expect = 2e-54
Identities = 94/157 (59%), Positives = 122/157 (77%)
Frame = +3
Query: 120 YEEPELLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGA 299
YE L S RVRR A G++TLNSDG+ G G KVP GN+KN++SA+GS+DL ++ K +
Sbjct: 49 YENAVQLASPRVRRQAQGSVTLNSDGSMGLGAKVPIVGNEKNVLSALGSVDLNDQLKPAS 108
Query: 300 ATAGVALDNVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIAN 479
G+ALDNVNGHG+S+ +PGFGD++T AG+VN+FHND HDI+AKAF T+NMPD N
Sbjct: 109 RGMGLALDNVNGHGLSVMKETVPGFGDRLTGAGRVNVFHNDNHDISAKAFVTKNMPDFPN 168
Query: 480 VPNFNTVGGGIDYMFKDKIGASATAXHTDFINRNDYS 590
VPNFNTVGGG+DYM+K+K+GAS +T F++R DYS
Sbjct: 169 VPNFNTVGGGVDYMYKNKVGASLGMANTPFLDRKDYS 205
>UniRef50_O96361 Cluster: Putative attacin; n=1; Hyphantria
cunea|Rep: Putative attacin - Hyphantria cunea (Fall
webworm)
Length = 233
Score = 176 bits (429), Expect = 3e-43
Identities = 82/152 (53%), Positives = 110/152 (72%)
Frame = +3
Query: 135 LLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGAATAGV 314
+L+ R RR G++ LN D TS A +K+P AG++KN++SA+GS+ + L +A+ G+
Sbjct: 39 ILSHHRARRQL-GSVFLNPDSTSRANIKLPLAGSNKNVLSALGSVGFDANKHLSSASGGL 97
Query: 315 ALDNVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPNFN 494
ALDNV GHG+SLT HIP FG+++T AG++NLFHN HD+ A AF TRNMP I VPNFN
Sbjct: 98 ALDNVRGHGLSLTGTHIPNFGNQLTGAGRLNLFHNQNHDLNANAFLTRNMPTIPQVPNFN 157
Query: 495 TVGGGIDYMFKDKIGASATAXHTDFINRNDYS 590
TV G ++YMFK+K+GAS A T F+ R DYS
Sbjct: 158 TV-GSLNYMFKNKVGASLGASRTPFLQRTDYS 188
>UniRef50_Q95NH6 Cluster: Attacin-C precursor [Contains:
Immune-induced peptide 16 (DIM-16) (MPAC)]; n=21;
Sophophora|Rep: Attacin-C precursor [Contains:
Immune-induced peptide 16 (DIM-16) (MPAC)] - Drosophila
melanogaster (Fruit fly)
Length = 241
Score = 67.3 bits (157), Expect = 3e-10
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Frame = +3
Query: 42 LLLVALCVGVQSRYLIV------SEPVYYIQHYEEPELLTSSRVRRDAHGALTLNSDGTS 203
+LL+ + VGV + ++P+ Y P + +R R+ G+LT N G +
Sbjct: 5 VLLIVVIVGVLGSLAVALPQRPYTQPLIYYPPPPTPPRIYRAR-RQVLGGSLTSNPSGGA 63
Query: 204 GAGVKVPFAGN--DKNIVSAIGSLDLTNRQKLGA-ATAGVALD-NVNGHGVSLTDIHIPG 371
A + + A D +++ + + T + + T+G L N +GHG+ LT H PG
Sbjct: 64 DARLDLSKAVGTPDHHVIGQVFAAGNTQTKPVSTPVTSGATLGYNNHGHGLELTKTHTPG 123
Query: 372 FGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASAT 551
D NLF+N H++ AKAFA++N +AN F+ G +DY GA+ T
Sbjct: 124 VRDSFQQTATANLFNNGVHNLDAKAFASQN--QLANGFKFDRNGAALDYSHIKGHGATLT 181
Score = 37.1 bits (82), Expect = 0.31
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 309 GVALD--NVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHN 419
G ALD ++ GHG +LT +IPG G ++ G+ NL+ +
Sbjct: 165 GAALDYSHIKGHGATLTHANIPGLGKQLELGGRANLWQS 203
>UniRef50_Q4PNY5 Cluster: Attacin; n=4; Calyptratae|Rep: Attacin -
Musca domestica (House fly)
Length = 208
Score = 63.7 bits (148), Expect = 3e-09
Identities = 50/152 (32%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Frame = +3
Query: 135 LLTSSRVRRDAHGALTLNSDGTSGAGVKV--PFAGNDKNIVSAIGSLDLTNRQKLGAATA 308
L T + V G++T NS G + ++ F N +N G + + G T
Sbjct: 12 LATLAVVNAQFGGSITSNSRGGADVFARLGHQFGDNKRNFG---GGVFASGNTLGGPVTR 68
Query: 309 GVALD-NVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVP 485
G L N + G SL+ FG + NLF ND H + A AF +R D N
Sbjct: 69 GAFLSGNADRFGGSLSHSRTDNFGSTFSQKLNANLFQNDKHKLDANAFHSRTNLD--NGF 126
Query: 486 NFNTVGGGIDYMFKDKIGASATAXHTDFINRN 581
FNTVGGG+DY + GAS TA +N N
Sbjct: 127 KFNTVGGGLDYNHANGHGASVTASRIPQLNMN 158
>UniRef50_Q5MGP9 Cluster: Defense protein 2; n=1; Lonomia
obliqua|Rep: Defense protein 2 - Lonomia obliqua (Moth)
Length = 113
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 387 TAAGKVNLFHNDXH--DITAKAF-ATRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAX 557
T +GK N+ HND H D+T K +R+ P N+ ++N +DY++KDK+ AS
Sbjct: 1 TGSGKYNILHNDNHNLDLTGKFLECSRSNP---NLSDYNKYSAILDYLYKDKLSASLGVA 57
Query: 558 HTDFINRNDYS 590
H+ ++R D S
Sbjct: 58 HSGLLDRTDLS 68
>UniRef50_Q17FI3 Cluster: Antibacterial peptide, putative; n=1;
Aedes aegypti|Rep: Antibacterial peptide, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 265
Score = 47.2 bits (107), Expect = 3e-04
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Frame = +3
Query: 192 DGTSGA-GVKVPFAGN-DKNIVSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDIHI 365
D T GA G F+G D+ VSA GS N ++ G + N H S T +
Sbjct: 92 DNTVGARGNLNLFSGQKDRFDVSAFGSQSTNNVKQFGTGL------HFNEHSFSATRTNQ 145
Query: 366 PGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGAS 545
PG G + G NLF + + AF +R P P+F + G G+++ + GAS
Sbjct: 146 PGAGSQTRLDGSANLFKTPSNRLDLNAFKSRTQP--VGSPSFGSHGAGLNWNNANGHGAS 203
Query: 546 ATAXHTDFINRND 584
A T I +
Sbjct: 204 AGFDRTPAIKETN 216
>UniRef50_Q29QG5 Cluster: IP02686p; n=5; Sophophora|Rep: IP02686p -
Drosophila melanogaster (Fruit fly)
Length = 192
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 294 GAATAGV-ALDNVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAF 449
G T GV N NGH +SL HI G G TAA + NLF ++ + A AF
Sbjct: 53 GPVTKGVYGAVNANGHALSLQHGHIEGVGSTTTAAAQANLFQSNNAALNATAF 105
>UniRef50_A7MMS4 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 473
Score = 38.7 bits (86), Expect = 0.10
Identities = 36/127 (28%), Positives = 52/127 (40%)
Frame = -2
Query: 544 DAPILSLNI*SIPPPTVLKLGTLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPG 365
DAP+L+ + P V + A+A + + T PA V +P P
Sbjct: 187 DAPLLATP--PVSPAPVAPAPAAPVHASAAALAAYAAEAEATTPPEETAPAPVK-APTPA 243
Query: 364 MCISVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSEL 185
V L WP + AVAAP L++ KE A T+ ++ + PAP V S
Sbjct: 244 RRSRVPLWTWPLAAAVVMGAVAAPVTWYLLQQKETAAPTVSVAQIKAQEIAPAP-VKSVD 302
Query: 184 SVRAPCA 164
+ AP A
Sbjct: 303 APAAPAA 309
>UniRef50_UPI0000DA3F46 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 488
Score = 36.3 bits (80), Expect = 0.54
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 403 TLPAAVTLSPNPGMCISVRLT-PWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPA 227
TL AA+TL+ + ++ LT TL++A AA + + + LT L+LPA
Sbjct: 251 TLTAALTLTAALTLTLTTALTLTAALTLTAALTLTAALTLTAALTLTAALTLTAALTLPA 310
Query: 226 KGTLTPAPEVPSELSVRAPCASLRTL 149
TLT A +P+ L++ A TL
Sbjct: 311 ALTLTAALTLPTALTLTLTAALTLTL 336
Score = 34.7 bits (76), Expect = 1.7
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -2
Query: 478 LAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCISVR--LTPWPFTLSSATPA 305
L ++ + + + +L TLP A+TL+ + +++ LT TL++A
Sbjct: 115 LTLTAALTLTAVLTLTAALTLTAVLTLPTALTLTLTTALTLTLTAALTLTTLTLTAAPTL 174
Query: 304 VAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 206
AAP+ ++ + LT L+L A TLT A
Sbjct: 175 TAAPTLTAVLTLTAALTLTAALTLSAALTLTAA 207
>UniRef50_Q8VP03 Cluster: Putative integral membrane protein; n=2;
Bordetella avium|Rep: Putative integral membrane protein
- Bordetella avium
Length = 452
Score = 35.9 bits (79), Expect = 0.72
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = -2
Query: 493 LKLGTLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCISVRLTPWPFTLSSA 314
LKL L + +V+ AFA+M ++ F+LPA +S P +++P P T A
Sbjct: 218 LKL-LLRLGSTVIVSTAFALMLHTGPFQGFSLPA---ISETP-----TQVSPPPATNPLA 268
Query: 313 TPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVRAPCASLR---TLEL 143
T + A S ++ P + L A+ PAP + SVR P S + L
Sbjct: 269 TSSAQADSATPAPQAAPPAQPAPAVGLAAEAAPLPAPSLAPSASVRPPNESQTMPLQITL 328
Query: 142 VNSSGSS 122
N GSS
Sbjct: 329 QNGDGSS 335
>UniRef50_Q6Z1D9 Cluster: Plus agglutinin-like protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Plus
agglutinin-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 283
Score = 35.9 bits (79), Expect = 0.72
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Frame = -2
Query: 514 SIPPPTVLKLGTLAISGIFLVAKAFAVMS--WXSLWKRFTLPAAVTLSPNPGMCISVRLT 341
S+PPPT AI+ + + W +F + T SP ++
Sbjct: 20 SVPPPTSSSPAETAIAAHVAPDSGLSRSRPCAQTTWDQFPSTPS-TKSPTFPQFLAPNRA 78
Query: 340 PWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEV--PSELSVRAP 170
P P TLSS +PAVAAP+ L P A+ L + +PEV PS + RAP
Sbjct: 79 PTPLTLSSTSPAVAAPNSPLPGSPLLPRAIKSHPVL-SSSVSPSSPEVLAPSPVRARAP 136
>UniRef50_O77242 Cluster: Mucin-like protein; n=1; Heterodera
glycines|Rep: Mucin-like protein - Heterodera glycines
(Soybean cyst nematode worm)
Length = 412
Score = 35.9 bits (79), Expect = 0.72
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = -2
Query: 397 PAAVTLSPNPGMCISVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAK-- 224
PA T +P P + I TP P TPA P L VK+ P T SLP K
Sbjct: 278 PAPSTTTPCPSLPIK---TPAP------TPAATTPCPSLPVKTPAPSTTTPCPSLPVKTP 328
Query: 223 --GTLTPAPEVPSELSVRAPCAS 161
T TP P +P + AP A+
Sbjct: 329 APSTTTPCPSLPVKTKTPAPTAT 351
>UniRef50_Q2GW84 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 431
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 338 RSKSHGYTHPRVRRQGDSCRQSESLPQRXPRHHSEGFRHQKYARY 472
R SHG P ++Q S R++ Q+ RHH +G RHQ R+
Sbjct: 146 RDGSHG---PETQQQSTSTRENSQEQQQQQRHHDDGDRHQPRGRF 187
>UniRef50_Q02505 Cluster: Mucin-3A precursor; n=25; Eutheria|Rep:
Mucin-3A precursor - Homo sapiens (Human)
Length = 2541
Score = 35.5 bits (78), Expect = 0.95
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = -2
Query: 385 TLSPNPGMCISVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPA 206
T PG S+ T T S +TP++++ + V + + F + ++ +TP
Sbjct: 1637 TSHSTPGFTSSITTTE---TTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPT 1691
Query: 205 PEVPSELSVRAPCASLRTL 149
P PS LS P SLRTL
Sbjct: 1692 PVTPSSLSTDIPTTSLRTL 1710
>UniRef50_A2QVK4 Cluster: Contig An11c0050, complete genome; n=3;
Eurotiomycetidae|Rep: Contig An11c0050, complete genome
- Aspergillus niger
Length = 692
Score = 35.1 bits (77), Expect = 1.3
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +3
Query: 135 LLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGNDKNIV-SAI--GSLDLTNRQKLGAAT 305
++ + + A G +L T G+G++ GN + SA+ + D TN G A
Sbjct: 592 MVNDEKKDQPAGGDSSLPGISTPGSGIQGLTPGNGGSAGDSALDGANFDFTNMDSAGDAL 651
Query: 306 AGVALDNVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDI 434
A N G+ L D+ FGD A+ N H+D D+
Sbjct: 652 AAYTEQN---EGLDLPDLENSAFGDAFHASDNENTHHHDADDM 691
>UniRef50_A6U9F0 Cluster: Porin precursor; n=3; Rhizobiaceae|Rep:
Porin precursor - Sinorhizobium medicae WSM419
Length = 215
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +3
Query: 453 TRNMPDIANVPN----FN--TVGGGIDYMFKDKIGASATAXHTDFINRN 581
TR D+A P FN T+GGG+DY F D + A + DF +++
Sbjct: 146 TRGFVDVAGAPKEKETFNGWTIGGGVDYGFTDSVFGRAEYRYNDFSDKD 194
>UniRef50_Q4QCS6 Cluster: Calpain-like cysteine peptidase, putative;
n=2; Leishmania|Rep: Calpain-like cysteine peptidase,
putative - Leishmania major
Length = 743
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -2
Query: 301 AAPSFCLLVKSKEPIALTIFLSLP-AKGTLTPAPEVPSELSVRAPCASLRTLELVNSSGS 125
+ P CL + EP LT+ LS P +KGT+ + + + + + CAS V+ SGS
Sbjct: 523 SVPDLCLEIHVTEPTTLTLILSQPDSKGTVRESEDY-NPVMISIACASSAKTSPVSQSGS 581
>UniRef50_A5TUP6 Cluster: Possible outer membrane protein P1; n=3;
Fusobacterium nucleatum|Rep: Possible outer membrane
protein P1 - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 483
Score = 33.9 bits (74), Expect = 2.9
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Frame = +3
Query: 129 PELLTSSRVRRDAHGALTLNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGAATA 308
P+ +S++RRD L++ GA KV D +VSA G+ + K+ A
Sbjct: 319 PQYTINSKIRRDLPAILSV------GASYKV----TDSYLVSASGNFYFNRQAKMDRVKA 368
Query: 309 GVAL----DNVNGHGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIA 476
D NG ++L + + +K T G +N D AK T + D
Sbjct: 369 FRGHQHGGDYKNGWEIALGNEY--KLNEKFTLIGSINYA-----DTGAK---TASFNDTE 418
Query: 477 NVPNFNTVGGGIDYMFKDKIGASATAXH 560
N T+GGGI Y + D + +A+ H
Sbjct: 419 YALNSVTLGGGIRYQYDDSLSITASVAH 446
>UniRef50_Q8X1Y2 Cluster: Mating type 1-2 protein; n=1;
Mycosphaerella graminicola|Rep: Mating type 1-2 protein
- Mycosphaerella graminicola (Septoria tritici)
Length = 394
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 362 HPRVRRQGDSCRQSESLPQRXPRHHSEGFRHQKYA 466
H R R+G R S Q PRHH+ RHQ YA
Sbjct: 70 HDRRHRRGHRRRLFRSSHQDSPRHHARALRHQCYA 104
>UniRef50_P24490 Cluster: Sarcotoxin II-3 precursor; n=5;
Sarcophaga|Rep: Sarcotoxin II-3 precursor - Sarcophaga
peregrina (Flesh fly) (Boettcherisca peregrina)
Length = 294
Score = 33.9 bits (74), Expect = 2.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 369 GFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASA 548
G D +T + N+F ND H++ A F R+ N NF GG +DY + G +A
Sbjct: 174 GVSDTLTKSISANVFRNDNHNLDASVF--RSDVRQNNGFNFQKTGGMLDYSHANGHGLNA 231
>UniRef50_UPI0000DD834D Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 187
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = -2
Query: 397 PAAVTLSPNPGMCISVRLTPWPFTLSSATPAVAAPSF 287
PAA TLSP P S TPWP SS A A P+F
Sbjct: 32 PAARTLSPGPAPLSSHSATPWPEPRSSRAQA-APPAF 67
>UniRef50_Q47I42 Cluster: Anti-sigma factor antagonist; n=1;
Dechloromonas aromatica RCB|Rep: Anti-sigma factor
antagonist - Dechloromonas aromatica (strain RCB)
Length = 101
Score = 33.5 bits (73), Expect = 3.8
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +3
Query: 159 RDAHGALTLNSDGTSGAGVKVPFAGNDKNIVSAIGSLDLTNRQKLGAATAGVALDNVNGH 338
R+ G+ TS V V F+G D SA+G L L R KLG A VAL V G+
Sbjct: 26 REFRGSYEPLVSDTSVRSVVVDFSGVDYLDSSALGML-LMLRDKLGGANKEVALTGVRGN 84
Query: 339 GVSLTDI 359
+ DI
Sbjct: 85 VKQVLDI 91
>UniRef50_UPI0000F1FA14 Cluster: PREDICTED: similar to predicted
protein; n=15; Danio rerio|Rep: PREDICTED: similar to
predicted protein - Danio rerio
Length = 1342
Score = 33.1 bits (72), Expect = 5.0
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 342 VSLTDIHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPN 488
V++TD P KV KV F HDI+AK N P +VP+
Sbjct: 1023 VNITDAMNPTESTKVRMISKVRTFFRKLHDISAKLKTEPNSPQPLSVPD 1071
>UniRef50_Q3JV89 Cluster: Putative uncharacterized protein; n=6;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 683
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 329 KRPRSKSHGYTHPRVRRQGDSCRQSESLPQRXPRHHSEGFRHQKYARYR*CTQLQHCR-- 502
+RP+ + + H + RR R+ L R P++ RH KY R R +L+H R
Sbjct: 362 RRPKYRHRKHRHLKYRRLKRRRRKHRRLKHRRPKYRHRKHRHLKYRR-RKHRRLKHRRPK 420
Query: 503 WRNRLYVQR 529
+R+R + +R
Sbjct: 421 YRHRKHCRR 429
>UniRef50_Q2S381 Cluster: Periplasmic binding protein, putative;
n=1; Salinibacter ruber DSM 13855|Rep: Periplasmic
binding protein, putative - Salinibacter ruber (strain
DSM 13855)
Length = 350
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 364 MCISVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPE 200
MC + R P PF S + VAA F L + + L +FL + G PAP+
Sbjct: 1 MCPAARTLPTPFPPRSTSGPVAAFPFPALFMTSRSLGLLLFLVVLTGGCGDPAPD 55
>UniRef50_A2TPI2 Cluster: OmpA/MotB; n=3; Flavobacteria|Rep:
OmpA/MotB - Dokdonia donghaensis MED134
Length = 431
Score = 33.1 bits (72), Expect = 5.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 477 NVPNFNTVGGGIDYMFKDKIGASATAXHTDFIN 575
N P+ TV GG+ YMF +K+G + F N
Sbjct: 56 NTPSLYTVTGGVRYMFNEKVGLKGGIAYNSFEN 88
>UniRef50_A0JYF8 Cluster: NAD-glutamate dehydrogenase; n=6;
Actinomycetales|Rep: NAD-glutamate dehydrogenase -
Arthrobacter sp. (strain FB24)
Length = 1617
Score = 33.1 bits (72), Expect = 5.0
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Frame = +3
Query: 246 IVSAIGSLDLTNRQKLGAATAGV-----ALDNVNGHGVSLTDIHIPGFGDKVTAAGKVN 407
+V G+L +T R ++ AA GV A+DN G S +++I F D++ AAGK++
Sbjct: 1140 VVGEGGNLGMTQRGRIEAALQGVILNTDAIDNSAGVDCSDHEVNIKIFVDRMVAAGKLD 1198
>UniRef50_A3VTS2 Cluster: Sensory box histidine kinase; n=1;
Parvularcula bermudensis HTCC2503|Rep: Sensory box
histidine kinase - Parvularcula bermudensis HTCC2503
Length = 361
Score = 32.7 bits (71), Expect = 6.7
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Frame = +3
Query: 219 VPFAGNDKNIVSAIGSLDLTNRQKLGAATAG--VALDNVNGHGVSLTDIHIPGFGDKVTA 392
+P I SAIG L+ +L T V++D G+ ++I F
Sbjct: 219 IPMGAYVSRIASAIGHLEARENIRLNIRTESFDVSIDTAARIGLIASEIITNAFQHAFVT 278
Query: 393 AG----KVNLFHNDXHDITAKAFATRN-MPDIANVPNFNTVGGGIDYMFKDKIGAS 545
G +V+L H + + N MPD + P+ NT+G I D +GA+
Sbjct: 279 GGPGLIEVSLRHLSRGAMRLEVMDDGNGMPDNISWPDSNTMGASIVRTLSDGLGAT 334
>UniRef50_Q9VS76 Cluster: CG8541-PA; n=3; Sophophora|Rep: CG8541-PA
- Drosophila melanogaster (Fruit fly)
Length = 275
Score = 32.7 bits (71), Expect = 6.7
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Frame = -2
Query: 553 AVADAPILSLNI*SIPPPTVLKLGTLAISGIFL-VAKAFAVMSWXSLWKRFTLPAAVTLS 377
A A AP+L+ + S P P V K A + ++ A A + + + PA V +
Sbjct: 116 AAAPAPVLAKTVYSAPAPVVAKHVYSAPAQVYAPAAPVVAKTVYSAPAPVYAAPAPVYAA 175
Query: 376 PNPGMCISVRLTPWPF---TLSSATP---AVAAPSFCLLVKSKEPIALTIFLSLPAKGTL 215
P P + +V P P T+ SA A +AP+ V P+A T PA T
Sbjct: 176 PAPVVAKTVYSAPAPVLAKTVYSAPAPVYAASAPAVAKTVSYAAPLATTNVNHGPAATTY 235
Query: 214 T 212
T
Sbjct: 236 T 236
>UniRef50_Q9P7J9 Cluster: Sequence orphan; n=1; Schizosaccharomyces
pombe|Rep: Sequence orphan - Schizosaccharomyces pombe
(Fission yeast)
Length = 156
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 21 MFGKIVFLLLVALCVGVQSRYLIVSEPVYYIQHYEEPELLTSSRV 155
MFGK+ LL+ A + +Q + + P+ ++H E ELL ++RV
Sbjct: 1 MFGKVSSLLVFASFLIIQGAFATLVAPIGDLEHLSEIELLYTNRV 45
>UniRef50_Q6C5C7 Cluster: Similar to tr|Q8RY11 Arabidopsis thaliana
AT3g05350/T12H1_32; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q8RY11 Arabidopsis thaliana
AT3g05350/T12H1_32 - Yarrowia lipolytica (Candida
lipolytica)
Length = 651
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 231 GNDKNIVSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDIH 362
G D +VSA+ + D+T + L AGV D N V L +H
Sbjct: 137 GVDSRLVSAVEAEDITKKLALKIEEAGVQADEKNASSVKLVGLH 180
>UniRef50_Q8CG65 Cluster: SCO-spondin precursor; n=10; Eutheria|Rep:
SCO-spondin precursor - Mus musculus (Mouse)
Length = 4998
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 343 TPWPFTLSSATPAVA-APSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVRAPC 167
TPW +S PA FC + P +L + ++ A TL P PE E + C
Sbjct: 3026 TPWSVCSASCNPARRHRHRFCARPPHRAPFSLVLLTTVAAPTTLCPGPEAEEEPCLLPGC 3085
>UniRef50_Q8VHG2 Cluster: Angiomotin; n=21; Tetrapoda|Rep: Angiomotin
- Mus musculus (Mouse)
Length = 1126
Score = 32.7 bits (71), Expect = 6.7
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Frame = -2
Query: 397 PAAVTLSPNPGMCISVRLTPWPFT-LSSATPAVAAPSF--------CLLVKSKEPIALTI 245
PAA +P+P ++ P T +S+AT AA S +V P++
Sbjct: 909 PAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSISPAAPVAPAAVVPPAAPVSPAA 968
Query: 244 FLSLPAKGTLTPAPEVPSELSVRAPCASLRTLELVNSSGSS 122
+ +PA +LTPA P+ + A A+ T + ++ ++
Sbjct: 969 AVQIPAAASLTPATVSPTAATATAAVAAATTAAITAAAAAA 1009
>UniRef50_UPI0001554F5A Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 371
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 388 VTLSPNPGMCISVRLTPWPFTLSSATPAVAAPSF 287
+ L+P PG+ LT P+T+ ATP + AP F
Sbjct: 125 MNLTPTPGVAYQPNLTIIPWTVQPATPEMPAPLF 158
>UniRef50_UPI0000F2CA86 Cluster: PREDICTED: similar to mucin 16; n=14;
Monodelphis domestica|Rep: PREDICTED: similar to mucin 16
- Monodelphis domestica
Length = 2840
Score = 32.3 bits (70), Expect = 8.8
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 373 NPGMCISVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLP 230
+PG S TPWP + S + AV+AP ++ S P A++ + P
Sbjct: 1676 SPGESSSTPFTPWPTPVDSFSIAVSAPGTSIVPLSSFPTAISATETTP 1723
>UniRef50_UPI00006C04F2 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 85
Score = 32.3 bits (70), Expect = 8.8
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 232 PAKGTLTPAPEVPSELSVRAPCASLRTLELVNSSGSS 122
PA+GTL P P P + + +P A + LE+V+ GS+
Sbjct: 48 PARGTLQPRPRPPRKRWLLSPGAGAQQLEVVHLPGST 84
>UniRef50_Q4SI38 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 349
Score = 32.3 bits (70), Expect = 8.8
Identities = 32/121 (26%), Positives = 51/121 (42%)
Frame = -2
Query: 508 PPPTVLKLGTLAISGIFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCISVRLTPWPF 329
PPP+ + A S FL ++ AV L T+PA P P ++ +P
Sbjct: 220 PPPSPV---APASSAAFL-SETLAVSLASDLPSAATIPAPAC-EPPPQSPLAA-CSPCTT 273
Query: 328 TLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVRAPCASLRTL 149
T S+ TP +++ S P A ++ SLP+ +P P + S C + TL
Sbjct: 274 TASTQTPLLSSSCTTNTPASPLPTAPSLGRSLPSPAVTSPPPTLAPRKSTPRRCTATNTL 333
Query: 148 E 146
+
Sbjct: 334 D 334
>UniRef50_A2A700 Cluster: Novel protein; n=1; Mus musculus|Rep:
Novel protein - Mus musculus (Mouse)
Length = 185
Score = 32.3 bits (70), Expect = 8.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 406 FTLPAAVTLSPNPGMCISVRLTPWPFTLSSATPAVAAPSFCLLVKSK 266
F LP+ PG V L+PWP + T A PS L +K K
Sbjct: 44 FDLPSPDKPEKTPGYIKFVPLSPWPKVNQTKTVGTATPSIPLFLKEK 90
>UniRef50_Q89RD6 Cluster: ABC transporter permease protein; n=2;
Proteobacteria|Rep: ABC transporter permease protein -
Bradyrhizobium japonicum
Length = 269
Score = 32.3 bits (70), Expect = 8.8
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 463 IFLVAKAFAVMSWXSLWKRFTLPAAVTLSPNPGMCISVRLTPWPFTLSSATPAVAAP--S 290
+FLV F V++W + F +PA P+PG I+V T WP L + P A
Sbjct: 23 LFLV---FIVIAWDLAIRLFRIPAYQI--PSPGDVIAVLRTEWPELLRQSWPTTYATVCG 77
Query: 289 FCLLVKSKEPIALTI 245
F L P+A+ I
Sbjct: 78 FLLSALFGIPVAMLI 92
>UniRef50_Q113D0 Cluster: Mg-chelatase subunit ChlI-like; n=1;
Trichodesmium erythraeum IMS101|Rep: Mg-chelatase
subunit ChlI-like - Trichodesmium erythraeum (strain
IMS101)
Length = 650
Score = 32.3 bits (70), Expect = 8.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 368 RVRRQGDSCRQSESLPQRXPRHHSEGFRHQKYARYR*CTQLQHCRWRNRLYVQR*DWCIS 547
R ++QG++ + + LP R+ Q + T L++C+W +L + W S
Sbjct: 413 RQKKQGNNYHKLKILPSDLYRYRRASVAEQMFMLLLDYTCLEYCQWEEKL-LPYLSWAYS 471
Query: 548 DRRSHGLHQ 574
R S GL Q
Sbjct: 472 QRASVGLIQ 480
>UniRef50_Q54JN8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 647
Score = 32.3 bits (70), Expect = 8.8
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = -2
Query: 406 FTLPAAVTLSP-NPGMCISVRLTPWPFTLSS-ATPAVAAPSFCLLVKSKEPIALTIFLSL 233
F LP A S +P +S LTP P + S+ +TP++ PS K+ P+ + + S+
Sbjct: 287 FPLPTATLASSLSPSSSLSTPLTP-PISQSTPSTPSIPTPSIPTSSKTLIPL-IPLIPSI 344
Query: 232 PAKGTLTPAPEVP--SELSVRAPCASLRTLELVNSS 131
P+ L P P P S + P S+ TL L S
Sbjct: 345 PSI-PLIPTPLTPPISPSTPSIPTPSIPTLPLSTPS 379
>UniRef50_Q2UM98 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 589
Score = 32.3 bits (70), Expect = 8.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 159 RDAHGALTLNSDGTSGAGVKVPFAGNDKNIVSAIGS-LDLTNRQKLGAATAGVALDNVNG 335
+ A G L+ T G+G++ GN G+ D TN G A A N
Sbjct: 499 KPAVGDAPLHGIETPGSGLQGLTPGNTGGDTGLDGANFDFTNMDSAGDALAAYTEQN--- 555
Query: 336 HGVSLTDIHIPGFGDKVTAAGKVNLFHNDXHDI 434
+ L D+ FGD A+ N H+D D+
Sbjct: 556 EVLDLPDLENSAFGDAFHASDNENTHHHDADDM 588
>UniRef50_A6QSU7 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 143
Score = 32.3 bits (70), Expect = 8.8
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = +3
Query: 198 TSGAGVKVPFAGNDKNIVSAI-----GSLDLTNRQ 287
+SGA KVP AGN+K + +A+ GSLD NRQ
Sbjct: 14 SSGASDKVPVAGNEKTVGAAVYNSSHGSLDDINRQ 48
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,814,340
Number of Sequences: 1657284
Number of extensions: 12287264
Number of successful extensions: 38794
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 37011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38740
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -