Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M23
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    32   0.35 
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 258  IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDIHIPGFGD 380
            IG +DL+    LG A     LDNV+ HG+ L  I  P  GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 210 GVKVPFAGNDKNIVSAIGSLDLTNRQ 287
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical
           protein ZK262.11 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 493 LKLGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 395
           L+  TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical
           protein C43D7.6 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 493 LKLGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 395
           L+  TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -2

Query: 322 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 149
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 148 ELVNSSGSS 122
           E ++S   S
Sbjct: 589 ENISSDFES 597


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 267 LDLTNRQKLGAATAGVAL--DNVNGHGVSLTDIHIPGF 374
           L L  R K+  A A VA   DNVNG    L+ I  PG+
Sbjct: 178 LPLATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 106 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 246
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,251
Number of Sequences: 27780
Number of extensions: 284688
Number of successful extensions: 763
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)