Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M20
         (77 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.092
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    19   3.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   6.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   6.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    18   8.0  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.092
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 56  NSWCNMSPYLFWLRRYE 6
           N+WC  SPY+ W + YE
Sbjct: 486 NNWC--SPYIGWQKVYE 500


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 59  TNSWCNMSPY 30
           +++WCN S Y
Sbjct: 144 SSTWCNYSAY 153


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -2

Query: 40  CLRTCS 23
           CLRTCS
Sbjct: 192 CLRTCS 197


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 59  TNSWCNMSPYLFWLRRYET 3
           T SW +MS  +  +  Y T
Sbjct: 195 TGSWLDMSGGMHQMANYST 213


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +3

Query: 15  PQPEQVRRHVAPRVRAG 65
           P P + RRH+   + AG
Sbjct: 332 PGPARSRRHLPAHLVAG 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,195
Number of Sequences: 336
Number of extensions: 169
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 7
effective length of database: 120,233
effective search space used:  2164194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)