Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M19
         (365 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.2  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 353 NMSVCEGSSVTVDI 312
           ++ VCEG  V +D+
Sbjct: 175 SIQVCEGDKVVIDV 188


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 353 NMSVCEGSSVTVDI 312
           ++ VCEG  V +D+
Sbjct: 175 SIQVCEGDKVVIDV 188


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 QPSRSYPHKHSY 352
           QPS+  P KH Y
Sbjct: 102 QPSQHCPRKHGY 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,267
Number of Sequences: 336
Number of extensions: 1237
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)