Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M18
         (603 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)              99   2e-21
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)              97   7e-21
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)              91   8e-19
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)        87   1e-17
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  

>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 407

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 443 SVFLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           + FLFTSESVGEGHPD+MCDQISDAILDAHLKQDPNAKVACETV KTG
Sbjct: 29  NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTG 76


>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 91

 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = +2

Query: 443 SVFLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           + FLFTSESVGEGHPD+MCDQISDAILDAHLKQDPNAKVACE+V KTG
Sbjct: 9   NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAKTG 56


>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 428

 Score = 90.6 bits (215), Expect = 8e-19
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +2

Query: 425 YDMEDGSVFLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           Y   D   FLFTSESV EGH D+MCDQISDA+LDAHL+QDP AKVACET TKTG
Sbjct: 44  YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATKTG 97


>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
          Length = 70

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 38/41 (92%), Positives = 40/41 (97%)
 Frame = +2

Query: 443 SVFLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVAC 565
           + FLFTSESVGEGHPD+MCDQISDAILDAHLKQDPNAKVAC
Sbjct: 29  NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69


>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 261 RRHRTNILSQ*ISCCAPSSR-LLFVTMFCFDYVNLICYLIIITSNWE 124
           R+  T++    IS  A  SR  + + + C +    +C  + +TSNWE
Sbjct: 179 RKRNTSVNRSNISASARKSRSCILLRLCCSENRKTMCVPLALTSNWE 225


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,997
Number of Sequences: 59808
Number of extensions: 368305
Number of successful extensions: 1602
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)