Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M18
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical pr...    99   3e-21
U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily ass...    93   1e-19
U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical pr...    93   1e-19
U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical pr...    93   1e-19
U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical pr...    93   1e-19
AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical...    81   6e-16
U41009-7|AAN84884.1|   51|Caenorhabditis elegans Hypothetical pr...    79   2e-15
U41009-6|AAK68167.2|   84|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical...    27   7.8  

>Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical
           protein C49F5.1 protein.
          Length = 403

 Score = 98.7 bits (235), Expect = 3e-21
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 443 SVFLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           S FLFTSESV EGHPD+MCDQISDA+LDAHLKQDPNAKVACETVTKTG
Sbjct: 3   SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTG 50


>U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 32, isoform a protein.
          Length = 404

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVACETVTKTG
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTG 51


>U41009-5|AAO44915.1|  173|Caenorhabditis elegans Hypothetical
           protein C06E7.1d protein.
          Length = 173

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVACETVTKTG
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTG 51


>U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.1a protein.
          Length = 404

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVACETVTKTG
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTG 51


>U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.3a protein.
          Length = 404

 Score = 93.5 bits (222), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTG 586
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVACETVTKTG
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTG 51


>AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12b protein.
          Length = 363

 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVACETVTKTGN 589
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVAC    KT N
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCN 52


>U41009-7|AAN84884.1|   51|Caenorhabditis elegans Hypothetical
           protein C06E7.1c protein.
          Length = 51

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQISDAILDAHLKQDPNAKVAC 565
           FLFTSESV EGHPD+MCDQISDA+LDAHL QDP+AKVAC
Sbjct: 6   FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44


>U41009-6|AAK68167.2|   84|Caenorhabditis elegans Hypothetical
           protein C06E7.1b protein.
          Length = 84

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 449 FLFTSESVGEGHPDQMCDQ 505
           FLFTSESV EGHPD+MCDQ
Sbjct: 6   FLFTSESVSEGHPDKMCDQ 24


>AC025716-18|AAT81178.1|  998|Caenorhabditis elegans Hypothetical
            protein Y39G10AR.3 protein.
          Length = 998

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 377  ETSKIMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDQMCD 502
            E  KIM+  AK N    ++ED    +   ++  EGH +QM D
Sbjct: 909  EKLKIMDATAKQNSLLREIEDLKSKIKEQDTTFEGHRNQMSD 950


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,581,568
Number of Sequences: 27780
Number of extensions: 280073
Number of successful extensions: 599
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)