Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M17
(210 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 27 0.45
SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase |Schizosaccharom... 26 0.59
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 25 1.0
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 25 1.4
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 24 2.4
SPCC1840.09 |||NAD dependent epimerase/dehydratase family protei... 24 2.4
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 23 5.5
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 23 7.3
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 23 7.3
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 22 9.6
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 22 9.6
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 0.45
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 11 MKVTVTGGGGFLGARLADYLLE 76
M++ VTG GF+G+ + LLE
Sbjct: 1 MRIFVTGAAGFIGSEIVRQLLE 22
>SPBPB2B2.11 |||nucleotide-sugar 4,6-dehydratase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 26.2 bits (55), Expect = 0.59
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLE 76
+TGG GF+G+ DY ++
Sbjct: 14 ITGGAGFIGSNFLDYAVD 31
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 1.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLE 76
V VTG GF+GA +A+ LL+
Sbjct: 6 VLVTGVTGFIGAHVAEQLLQ 25
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 1.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 74 ENECPLRVSALLXTDVHQPTLSPXRHADSRVSXLAADVTAPGVAE 208
E + P R SAL T+V + L HA + +S A + P + +
Sbjct: 205 ELKSPSRPSALAETNVEELELDSLFHASNDISCSATSFSEPYILD 249
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLE 76
V VTGG G++G+ LLE
Sbjct: 9 VLVTGGAGYIGSHTCVVLLE 28
>SPCC1840.09 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 11 MKVTVTGGGGFLG 49
MK+ V GG GFLG
Sbjct: 1 MKIVVLGGSGFLG 13
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 23.0 bits (47), Expect = 5.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 62 DYLLENECPLRV 97
D LL+NECPL V
Sbjct: 144 DRLLQNECPLYV 155
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 22.6 bits (46), Expect = 7.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 192 AVTSAARXETRESACRXGERVG 127
A + A+ E CR GE+VG
Sbjct: 153 AAVNLAKRVAAEQGCRLGEQVG 174
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 92 AEGTRFPIDNQRDELRGILRR 30
A T PIDN ++ L +LRR
Sbjct: 861 ASTTLHPIDNAKNRLVSLLRR 881
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 22.2 bits (45), Expect = 9.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 65 NQRDELRGILRRR 27
NQR+E ILRRR
Sbjct: 936 NQREEAENILRRR 948
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 22.2 bits (45), Expect = 9.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLENECPLRVSALL 109
V +TG G+LG + L+ L+V AL+
Sbjct: 1007 VFLTGANGYLGVFILRDLMTRSSNLKVIALV 1037
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.133 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,654
Number of Sequences: 5004
Number of extensions: 5649
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 2,362,478
effective HSP length: 49
effective length of database: 2,117,282
effective search space used: 42345640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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