Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M17
(210 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004929-1|AAH04929.1| 369|Homo sapiens hydroxy-delta-5-steroid... 32 0.29
AK057436-1|BAB71486.1| 196|Homo sapiens protein ( Homo sapiens ... 32 0.29
AF277719-1|AAG37824.1| 369|Homo sapiens 3 beta-hydroxy-delta 5-... 32 0.29
BC142684-1|AAI42685.1| 907|Homo sapiens deafness, autosomal rec... 28 6.3
AK022854-1|BAB14275.1| 556|Homo sapiens protein ( Homo sapiens ... 28 6.3
BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate decarbo... 27 8.3
AY393627-1|AAR02501.1| 156|Homo sapiens immunoglobulin heavy ch... 27 8.3
AY393619-1|AAR02493.1| 156|Homo sapiens immunoglobulin heavy ch... 27 8.3
AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein. 27 8.3
AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid dec... 27 8.3
AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens ... 27 8.3
AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens ... 27 8.3
>BC004929-1|AAH04929.1| 369|Homo sapiens hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 7
protein.
Length = 369
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLENECPLRVSALLXTDVH-QPTLSPXRHADSRVSXLAADVT 190
VTGG GFLG + LL+ E P R+ L D H P L + RV+ + DVT
Sbjct: 14 VTGGCGFLGEHVVRMLLQRE-P-RLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVT 68
>AK057436-1|BAB71486.1| 196|Homo sapiens protein ( Homo sapiens
cDNA FLJ32874 fis, clone TESTI2004000, highly similar to
Rattus norvegicus cca2 mRNA. ).
Length = 196
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLENECPLRVSALLXTDVH-QPTLSPXRHADSRVSXLAADVT 190
VTGG GFLG + LL+ E P R+ L D H P L + RV+ + DVT
Sbjct: 14 VTGGCGFLGEHVVRMLLQRE-P-RLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVT 68
>AF277719-1|AAG37824.1| 369|Homo sapiens 3 beta-hydroxy-delta
5-C27-steroid oxidoreductase protein.
Length = 369
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLENECPLRVSALLXTDVH-QPTLSPXRHADSRVSXLAADVT 190
VTGG GFLG + LL+ E P R+ L D H P L + RV+ + DVT
Sbjct: 14 VTGGCGFLGEHVVRMLLQRE-P-RLGELRVFDQHLGPWLEELKTGPVRVTAIQGDVT 68
>BC142684-1|AAI42685.1| 907|Homo sapiens deafness, autosomal
recessive 31 protein.
Length = 907
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 137 RGSADAHPXTAAPRLAEGTRFPIDNQRDELRGILRRRSQSPSCFG 3
+G + P P LA+G P+ R R L+ S +PSC G
Sbjct: 574 QGLSSFKPLPRPPPLAQGNDLPLGQPRKLGREDLQPPSSTPSCSG 618
>AK022854-1|BAB14275.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ12792 fis, clone NT2RP2002032. ).
Length = 556
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 137 RGSADAHPXTAAPRLAEGTRFPIDNQRDELRGILRRRSQSPSCFG 3
+G + P P LA+G P+ R R L+ S +PSC G
Sbjct: 223 QGLSSFKPLPRPPPLAQGNDLPLGQPRKLGREDLQPPSSTPSCSG 267
>BC009819-1|AAH09819.2| 420|Homo sapiens UDP-glucuronate
decarboxylase 1 protein.
Length = 420
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>AY393627-1|AAR02501.1| 156|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 156
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 44 LGARLADYLLENECPLRVSALLXTDVHQPTLSPXRHADSRVSXLAADVTAPG 199
+G DY + + + +S + T+ LS R DS V AAD++ PG
Sbjct: 49 IGTGDTDYAQKFQERVTISGDMSTNTAYMELSSLRADDSAVYYCAADISVPG 100
>AY393619-1|AAR02493.1| 156|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 156
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 44 LGARLADYLLENECPLRVSALLXTDVHQPTLSPXRHADSRVSXLAADVTAPG 199
+G DY + + + +S + T+ LS R DS V AAD++ PG
Sbjct: 49 IGTGDTDYAQKFQERVTISGDMSTNTAYMELSSLRADDSAVYYCAADISVPG 100
>AY358541-1|AAQ88905.1| 420|Homo sapiens UXS1 protein.
Length = 420
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>AY147934-1|AAN39844.1| 420|Homo sapiens UDP-glucuronic acid
decarboxylase protein.
Length = 420
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
>AK075170-1|BAC11448.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ90689 fis, clone PLACE1006219, weakly similar to
PUTATIVE UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2). ).
Length = 425
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 95 RILITGGAGFVGSHLTDKLM 114
>AK075120-1|BAC11415.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ90639 fis, clone PLACE1003845, highly similar to
UDP-glucuronate decarboxylase 1. ).
Length = 420
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 90 RILITGGAGFVGSHLTDKLM 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.133 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,008,950
Number of Sequences: 237096
Number of extensions: 238204
Number of successful extensions: 455
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 76,859,062
effective HSP length: 48
effective length of database: 65,478,454
effective search space used: 1375047534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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