Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_M17
(210 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical pr... 28 0.79
U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical pr... 27 1.4
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 27 1.4
U23511-14|AAC46799.1| 357|Caenorhabditis elegans Hypothetical p... 27 1.4
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 27 1.4
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 27 1.8
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 27 1.8
U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical pr... 27 2.4
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 25 7.3
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 25 7.3
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 25 9.7
>U41510-1|ABP49525.1| 327|Caenorhabditis elegans Hypothetical
protein ZC449.6 protein.
Length = 327
Score = 28.3 bits (60), Expect = 0.79
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLEN 79
+TGGGGFLGA L L +N
Sbjct: 9 ITGGGGFLGAHLIAALQKN 27
>U40939-5|AAA81703.3| 343|Caenorhabditis elegans Hypothetical
protein F13D11.4 protein.
Length = 343
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLLEN 79
KV VTG GF+G + LL+N
Sbjct: 7 KVLVTGASGFIGTHCVEILLKN 28
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 138 RILITGGAGFVGSHLVDKLM 157
>U23511-14|AAC46799.1| 357|Caenorhabditis elegans Hypothetical
protein C32D5.12 protein.
Length = 357
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLENE 82
V VTGG G +G + LLENE
Sbjct: 4 VAVTGGAGLVGRYVVQRLLENE 25
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 14 KVTVTGGGGFLGARLADYLL 73
++ +TGG GF+G+ L D L+
Sbjct: 138 RILITGGAGFVGSHLVDKLM 157
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 80 ECPLRVSALLXTDVHQPTLSPXRHADSRVS 169
ECP R+SA+ VHQ T +P +V+
Sbjct: 625 ECPPRMSAIDKKCVHQQTAAPGEPCSEKVA 654
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 80 ECPLRVSALLXTDVHQPTLSPXRHADSRVS 169
ECP R+SA+ VHQ T +P +V+
Sbjct: 625 ECPPRMSAIDKKCVHQQTAAPGEPCSEKVA 654
>U64862-7|AAB52622.1| 374|Caenorhabditis elegans Hypothetical
protein ZC8.1 protein.
Length = 374
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 23 VTGGGGFLGARLADYLLENECPLRV 97
+ GGGGFLGA + L + C R+
Sbjct: 6 IVGGGGFLGAHVISALQKIGCKERI 30
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYL 70
V +TGG GF+G+ +Y+
Sbjct: 8 VVITGGCGFIGSNFVNYI 25
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLENE 82
V V G GF GA + +YL+ +E
Sbjct: 6 VVVYGASGFTGAYVVEYLVNSE 27
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 17 VTVTGGGGFLGARLADYLLENE 82
V V G GF GA + +YL+ +E
Sbjct: 6 VVVYGASGFTGAYVVEYLVNSE 27
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 113 TDVHQPTLSPXRHADSRVS 169
+DV P LSP RHA VS
Sbjct: 1408 SDVDMPRLSPARHAPPVVS 1426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.133 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,050,866
Number of Sequences: 27780
Number of extensions: 34995
Number of successful extensions: 78
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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