Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M11
         (550 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.    33   0.10 
Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical p...    33   0.10 
AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical ...    33   0.10 
AL117202-3|CAB55094.2|  691|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z70207-3|CAA94132.1|  336|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U64852-5|AAB04968.1|  746|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U06933-1|AAA64938.1|  551|Caenorhabditis elegans CeSWAP protein.       27   6.7  

>Z99267-1|CAB16465.1|  732|Caenorhabditis elegans C33A12.12 protein.
          Length = 732

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 317 NVMNSYCSESLKCGAFFFDVNPCDDXFMIDALDAAKSFYNQLNNVS 454
           N++N YC ESL  G+   +  P +D F    +D A    N LN  S
Sbjct: 78  NMVNKYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGS 123


>Z68493-14|CAA92801.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 317 NVMNSYCSESLKCGAFFFDVNPCDDXFMIDALDAAKSFYNQLNNVS 454
           N++N YC ESL  G+   +  P +D F    +D A    N LN  S
Sbjct: 78  NMVNKYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGS 123


>AL033537-1|CAA22147.1|  732|Caenorhabditis elegans Hypothetical
           protein C33A12.12 protein.
          Length = 732

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +2

Query: 317 NVMNSYCSESLKCGAFFFDVNPCDDXFMIDALDAAKSFYNQLNNVS 454
           N++N YC ESL  G+   +  P +D F    +D A    N LN  S
Sbjct: 78  NMVNKYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGS 123


>AL117202-3|CAB55094.2|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.4 protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 73  LIIAYKQYNGDDNKDDFNSVRNYTNILRSSRDN---KKF*HLENSSQPFLR 216
           L+ A   Y GD +K D ++V NY   + +S  N   +   +L N+  PF R
Sbjct: 111 LLSAVNNYGGDHHKSDLSNVLNYCKRVFASCSNTRHQSVIYLTNNRNPFER 161


>Z70207-3|CAA94132.1|  336|Caenorhabditis elegans Hypothetical
           protein F15A2.3 protein.
          Length = 336

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 265 FNLNLTISYAQNIF*FFVRKVGWSSQGARISYYLLRSAKY 146
           ++LN+T++ + NI   F+ K   SS    + YYL  +A +
Sbjct: 16  YSLNVTLALSINILLLFIMKTTKSSLLKDMQYYLFNTALF 55


>U64852-5|AAB04968.1|  746|Caenorhabditis elegans Hypothetical
           protein W01A11.5 protein.
          Length = 746

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 314 GNVMNSYCSESLKCGAFFFDVNPCDD 391
           GNV N+   + ++C  FFF ++  DD
Sbjct: 374 GNVKNAQILKEIECAVFFFTLDENDD 399


>U06933-1|AAA64938.1|  551|Caenorhabditis elegans CeSWAP protein.
          Length = 551

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 158 PQEIIRNSSTLRTPANLSYEELEYILSVRNGQ 253
           P  ++RNS ++ TPANL   +     S+RN +
Sbjct: 510 PITMVRNSKSVSTPANLDILKTPISFSLRNDE 541


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,896,839
Number of Sequences: 27780
Number of extensions: 202749
Number of successful extensions: 500
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)