Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_M11
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    25   0.38 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    25   0.38 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    25   0.38 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.2  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   4.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   4.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   6.2  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   THVFVVQYFIPILMIILCYKR 68
           T +F+  Y IP++ IIL Y R
Sbjct: 222 TCIFIWAYVIPLIFIILFYSR 242


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 12  VFVVQYFIPILMIILCYKREVNHSI 86
           +F   Y IP+++II  Y + V+H +
Sbjct: 215 IFTFSYCIPMILIIYYYSQIVSHVV 239


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 6   THVFVVQYFIPILMIILCYKR 68
           T +F+  Y IP++ IIL Y R
Sbjct: 222 TCIFIWAYVIPLIFIILFYSR 242


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 351 FNDSEQYEFITFPLQQP 301
           ++ S Q+EF+TF L +P
Sbjct: 358 YSPSVQHEFVTFDLDEP 374


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  IIAYKQYNGDDNKDDFNSVRNYTNIL 153
           II+   YN  +  +++NS + Y NI+
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNII 328


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 76  IIAYKQYNGDDNKDDFNSVRNYTNIL 153
           II+   YN  +  +++NS + Y NI+
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNII 339


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 446 YSVDYKKILPRPRRLS*IXH 387
           + +D+ K LP P+ L  I H
Sbjct: 496 WMIDFAKTLPLPQHLPRIHH 515


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 446 YSVDYKKILPRPRRLS*IXH 387
           + +D+ K LP P+ L  I H
Sbjct: 411 WMIDFAKTLPLPQHLPRIHH 430


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 446 YSVDYKKILPRPRRLS*IXH 387
           + +D+ K LP P+ L  I H
Sbjct: 730 WMIDFAKTLPLPQHLPRIHH 749


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 512 SHITLNDLNVLLFH*FIIT*RRYSVDYKKILPRPR 408
           S I +N    L F+  ++  RR++++  K+L  PR
Sbjct: 15  SFILINYFIFLYFN-SLVRFRRFTIELDKVLESPR 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,680
Number of Sequences: 438
Number of extensions: 3139
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)